Gene Pnec_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1708 
Symbol 
ID6183487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1493730 
End bp1494638 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content44% 
IMG OID641672211 
ProductPP-loop domain protein 
Protein accessionYP_001798381 
Protein GI171464268 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGATA TTCGTAAAAT TGTCTTCGAA GAAAATAAGT TAGAGAAAAA ACTCTGCCGC 
TTAGTTGGTC AGGCCATTTG TGACTTTGGC ATGATCGAAG ATGGTGACAA GGTTATGGTG
TGCGTATCTG GCGGCAAAGA TAGTTACGCC ATGCTCGATC TCTTGATGAA GTTGCGTGAG
CGTGCACCCA TCAATTTTGA AATCGTCGCA GTCAATCTGG ATCAAAAACA ACCCAATTTC
CCCACGAACA TATTGCCCAA TTACCTAAAG AGTCTTGACA TTCAGTATCA CATTGAAGAG
CAGGATACCT ACAGCATTGT GAAGCGTGTG ATTCCCGATG GTAAAACGAC TTGTGGATTA
TGCTCGCGTT TGCGTCGTGG AATTTTGTAC CGCGTGGCAG ATGAATTGGG CGCAACAAAG
ATTGCTTTAG GTCATCATCG TGACGACATC TTAGAAACTT TGATGCTTAA TATGTTTTAT
GCGGGCAAAC TCAAGGGCAT GCCGCCAAAG TTGCGTTCTG ATGATGGCAA GCATATTGTG
ATTCGTCCAT TAGCCTACGT TCCTGAAAAA TTGCTAGAAC GTTATTCAGC AGACATGAAC
TTCCCCATCA TCCCATGTGA TTTATGCGGT AGTCAGCCTA ACCTCCAACG TCAAGTAATG
AAAGAAATGC TCCGCGACTG GGAAAAGAAG CACCCAGGTC GAGTAGAGAA CTTATTTCGC
TCTATGCACC ATATCGTCCC GTCACATTTG ATGGATGGAG AAGCTTTTGA TTTCAAAAAC
CTGGAGATTT CTTCGGAGTT ATCGGGTATT GCCGCCAGAT CCTCGGGAGA TAGGGCAATT
GATGAGGCTG ATTTAGATGA ATTGGCCTGT GGAACTTTGA TACAGGGGAC TTATAATCCC
CCTTTATGA
 
Protein sequence
MGDIRKIVFE ENKLEKKLCR LVGQAICDFG MIEDGDKVMV CVSGGKDSYA MLDLLMKLRE 
RAPINFEIVA VNLDQKQPNF PTNILPNYLK SLDIQYHIEE QDTYSIVKRV IPDGKTTCGL
CSRLRRGILY RVADELGATK IALGHHRDDI LETLMLNMFY AGKLKGMPPK LRSDDGKHIV
IRPLAYVPEK LLERYSADMN FPIIPCDLCG SQPNLQRQVM KEMLRDWEKK HPGRVENLFR
SMHHIVPSHL MDGEAFDFKN LEISSELSGI AARSSGDRAI DEADLDELAC GTLIQGTYNP
PL