Gene Pnec_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1670 
Symbol 
ID6184593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1462881 
End bp1463147 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content39% 
IMG OID641672185 
Productprotein of unknown function DUF493 
Protein accessionYP_001798355 
Protein GI171464242 
COG category[S] Function unknown 
COG ID[COG2921] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG AAAAATCTTT AATCGAGTAC CCATCACTAT TTCCTATCAA AGTAATGGGT 
AAAACCAATC CAGAATATTT GCCGGCGATT ATTCATATTG CTAAACAATT TGATCCTACA
TTTGATGAGA GCAAAGTTGA GCAGCGTCCA TCCAAGGATG GAAATTACTT GGGTATTACT
TTGCCAATTA CTGCCACGAG TCGTGAGCAG TTGGATGAGC TCTATAGAAC TTTATCGACA
CATCCATTGG TCAGTGTAGT TCTGTAA
 
Protein sequence
MAEEKSLIEY PSLFPIKVMG KTNPEYLPAI IHIAKQFDPT FDESKVEQRP SKDGNYLGIT 
LPITATSREQ LDELYRTLST HPLVSVVL