| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1669 |
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| Symbol | lipB |
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| ID | 6183615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1462229 |
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| End bp | 1462873 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672184 |
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| Product | lipoyltransferase |
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| Protein accession | YP_001798354 |
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| Protein GI | 171464241 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCTT TAGTAAAACA GCTTGGATTG GCGGATTACG CATCGACGTA TGAGGCTATG
CAAGCATTTA CAAAGGCGCG TACTAGTGAG ACGCTTGATG AGATTTGGGT CTTAGAGCAC
CCCCCTGTTT TCACTTTGGG CCTGGCTGGA GATGCAGGCA ATTTACATTC ACCCAGCAAT
CAAATTTCTT TGGTACAGGT TGATCGTGGC GGTGAAATCA CTTATCACGG GCCCGGCCAA
ATCGTTGTTT ACTTACTGCT CGACCTCAGG CGTTTGGGAA TTTTCGTAAA AGAATTGGTT
TCCCGAATAG AACAAGCAGT AATTGATACT TTGGCTGATT TTGGGGTTCA GGCTGAAAGG
CATCCGGGCG CTCCTGGTAT TTATGTCTCT CAGCAGTCAA GAGTGCCTCC AGAGTGGGTT
GGAGCAAAGA TTGCTGCCTT GGGCCTCAAA GTCTCCAAAA GCTGTTCCTA TCACGGCCTT
GCACTCAATG TTGCTACAGA TTTGGAGGCT TTTAAGCGCA TCCACCCTTG TGGTTACGAG
GGTTTAAAGA CTGTCGATAT GCAAACCCTT GGGATCAAGG ACAATATGGA CACTATTAGC
CTAAGGCTTT TGCAGCATTT ACAAAAGCAA CTGATACCAT CATGA
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| Protein sequence | MAALVKQLGL ADYASTYEAM QAFTKARTSE TLDEIWVLEH PPVFTLGLAG DAGNLHSPSN
QISLVQVDRG GEITYHGPGQ IVVYLLLDLR RLGIFVKELV SRIEQAVIDT LADFGVQAER
HPGAPGIYVS QQSRVPPEWV GAKIAALGLK VSKSCSYHGL ALNVATDLEA FKRIHPCGYE
GLKTVDMQTL GIKDNMDTIS LRLLQHLQKQ LIPS
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