Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1644 |
Symbol | |
ID | 6183465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1442406 |
End bp | 1444013 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641672162 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_001798332 |
Protein GI | 171464219 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.336541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.908171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG TCTCTACTAC CCACGATCAC GCGCATAATG ATCATATGTC ACATGGCTGG CGTCGTTGGT TGTTTGCAAC CAACCACAAA GACATCGGCA CGATGTATTT GATCTTCTCA TTCGTTAGCT TGTTGGCTGG CGGCGTGATG GCCTTGGGAA TTCGTTTGGA ATTATTCCAA CCAGGATTGC AATTTTTGCG TCCAGAGTTC TTTAATCAAT TAACCACCAT GCACGGTTTG GTGATGGTGT TCGGCGCGAT CATGCCGGCC TTCGTTGGTT TTGCGAACTG GATGGTGCCT TTGCAAATCG GCGCGTCTGA TATGGCATTT GCCCGTATGA ATAACTTTAG CTTCTGGATT CTTCCAGTGG CGGCAACATT GTTGTTGAGT TCATTCCTTG TTCCTGGTGG CGCTCCATCG GGTGGTTGGA CCATCTATGC TCCATTGACC TCGCAAATGG GTCCTGGCAT GGATATGGCG ATTTTTGCGC TCCACTTGTT GGGTGCTTCA TCCATCATGG GCTCAATTAA CATCATCGTA ACGATTTTGA ATATGCGCGC TCCTGGCATG ACGTTGATGA AGATGCCAAT GTTCTGCTGG ACTTGGTTGA TCACTGCGTA CTTGTTGATT GCTGTGATGC CTGTGTTGGC TGGCGCGATC ACGATGGTTC TGACTGACCG TCATTTCGAT ACTTCATTCT TCTCTGCTGT TGGCGGCGGT GACCCAATCA TGTTCCAGCA TATTTTCTGG TTCTTTGGTC ACCCAGAGGT TTACATCATG ATTCTTCCGG CATTCGGAAT CATTAGCGAA ATCGTTCCTG CTTTCTCCAG AAAGACATTG TTTGGCTATA GCTCTATGGT TTACGCAACC GCATCGATTG CGATCTTGTC GTTCATCGTT TGGGCTCACC ACATGTTTGC CACTGGTATG CCGGTAACTG GCCAATTGTT CTTTATGTAC GCAACCATGT TGATCGCTGT TCCAACTGGT GTGAAGATTT TCAACTGGGT AGCAACAATG TGGAAAGGTT CAATGACCTT TGGAACCCCA ATGTTGTGGG CTATCGGCTT TATCTTCGTT TTCACCATGG GCGGCTTTAC TGGTTTGATC TGTGCAATGG CACCAATTGA TATCGGTATT CAAGATACTT ATTACATCGT TGCTCACTTC CACTACGTAT TGGTAGCGGG TTCATTGTTC GCAATGTTCG CTGGCTTCTA CTACTGGTGC CCTAAGTGGA CTGGCTACGT GGCTAGCGAA ACTCGCGGCA AGATCCATTT TTGGGCTTCC ATGATTTTCT TTAACATCAC CTTCTTCCCA ATGCACTTTT TAGGTTTAGC AGGTATGCCA CGTCGCTATG CTGACTACCC AACCCAGTTT GCCGATTTCA ATGCGATTGC TTCGATTGGC GCGTTGGGCT TCGGTTTGGC GCAGGTTTAT TTCTTGCTCT TCGTTGTTAT GCCAGCGTAC CGCGGTCAAG GCGAAAAAGC GCCGATGAAA CCATGGGATG GTGCAAAAGG TTTGGAGTGG ACAGTGCCTT CTCCAGCGCC ACATCACACT TTTGAAAATC CGCCTAGTGT AGAGCAAATG CGTGAAGCAG GAATTTAA
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Protein sequence | MSTVSTTHDH AHNDHMSHGW RRWLFATNHK DIGTMYLIFS FVSLLAGGVM ALGIRLELFQ PGLQFLRPEF FNQLTTMHGL VMVFGAIMPA FVGFANWMVP LQIGASDMAF ARMNNFSFWI LPVAATLLLS SFLVPGGAPS GGWTIYAPLT SQMGPGMDMA IFALHLLGAS SIMGSINIIV TILNMRAPGM TLMKMPMFCW TWLITAYLLI AVMPVLAGAI TMVLTDRHFD TSFFSAVGGG DPIMFQHIFW FFGHPEVYIM ILPAFGIISE IVPAFSRKTL FGYSSMVYAT ASIAILSFIV WAHHMFATGM PVTGQLFFMY ATMLIAVPTG VKIFNWVATM WKGSMTFGTP MLWAIGFIFV FTMGGFTGLI CAMAPIDIGI QDTYYIVAHF HYVLVAGSLF AMFAGFYYWC PKWTGYVASE TRGKIHFWAS MIFFNITFFP MHFLGLAGMP RRYADYPTQF ADFNAIASIG ALGFGLAQVY FLLFVVMPAY RGQGEKAPMK PWDGAKGLEW TVPSPAPHHT FENPPSVEQM REAGI
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