Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1641 |
Symbol | |
ID | 6183634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1440614 |
End bp | 1441468 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641672159 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_001798329 |
Protein GI | 171464216 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0942479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.989825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA ATTCAACCTC ATACTATTTC GTCCCTGGAC TATCTAGACA TCCAGCAATG GCCGCATTCG GTTTAATTGC CTTTGGTTTT GGTATTTCTG GATGGGTAAA TCATGCCTCT TGGGGCGGCC CCTTCTGTCT TGCGGGCGTA GCTTTTGTTC TCTATGTACT CTACAACTGG TTTGGCGACA CGATTGCGGA GTCAAATGCT GGCAAGAATG GTGTCAACGT AGACATTTCA TATCGCTGGT CAATGGCATG GTTCATCTTC TCTGAGATCA TGTTCTTCGG CGCATTCTTT GTAGCCCTCT TCTATGCGCG CAACATTGCG ATGCCTTGGA TGGGTGACGT AGAAAGCAAA TTGCTCTGGC CTAATTTCCA AGCGGTTTGG CCAAATGATG GCCCTGCTGG TTTGGTTGAG AAATTCACCA CTATGGGTCC ATGGCCAATT CCAACAATCA ATACATTGTT GTTGTTGAGC TCTGGCGTGA CTATTACCAT TGCTCACCAT GCATTGGTAG AAAACCACAT GAAAAAAGCC ATCATTGGTT TGGCTGCAAC TGTTGGTCTA GGCGCGGTTT TCTTGGGCTT CCAAGTTTAT GAGTACTACC ATGCATACCA TGCGCTGAAC TTGAAGTTGA CTTCAGGTAT CTATGGCTCC ACATTCTTTA TGTTGACTGG CTTTCATGGT TTCCACGTTT TCCTTGGTGG CACCATGTTG GCGATCGTAT TGCGTCGTAT GATTCGCGGC GATTTCACTT CTAAGCATCA CTTCGCATTT GAAGGCGCTG CTTGGTATTG GCACTTTGTT GACGTAGTCT GGCTCGGTCT CTACATTGCT GTTTATTGGA TGTAA
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Protein sequence | MSSNSTSYYF VPGLSRHPAM AAFGLIAFGF GISGWVNHAS WGGPFCLAGV AFVLYVLYNW FGDTIAESNA GKNGVNVDIS YRWSMAWFIF SEIMFFGAFF VALFYARNIA MPWMGDVESK LLWPNFQAVW PNDGPAGLVE KFTTMGPWPI PTINTLLLLS SGVTITIAHH ALVENHMKKA IIGLAATVGL GAVFLGFQVY EYYHAYHALN LKLTSGIYGS TFFMLTGFHG FHVFLGGTML AIVLRRMIRG DFTSKHHFAF EGAAWYWHFV DVVWLGLYIA VYWM
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