| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1637 |
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| Symbol | |
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| ID | 6183229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1437745 |
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| End bp | 1438866 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672155 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001798325 |
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| Protein GI | 171464212 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0968838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.388921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGTT TGATTTTGTT TCTGGAGTTA GCTGCAATTG CAATTGTGTT TGCGGGCTTG
CCATTGCTCT ATCTTTGGAG AAAGCCGGGA TACAGTTTTT TCCAAAAACT CAATTGGTTA
TTGGTCTTTA TGACTTTTGA TCTGATTGTG TTCGGCGCCT TTACGCGCTT AACTGACTCG
GGCTTGGGTT GTCCTGACTG GCCTGGATGC TACGGCGCCT CCAATCCTTT GCATGCGCTG
AACGATATAC GGGAAGCTGA GAACGCTTTG CCCACTGGCC TTGTGACAGT GATTAAGGCG
TGGATTGAAA TGATTCATCG ATATTTAGCG ATGACGGTCG GCGCACTAAT TTTGATGCAA
GTATCGATTG CATTTACTAA GCTAAAGAGT GTAGGCAAGA AGCCTTTGTT TGGCAGTTTA
GGGTTGCTTG TACTAGTCTG TGTGCAAGGT GCTTTTGGCG CTTGGACGGT GACATTGAAG
CTGCAGCCGA TTATTGTCAC TGTACATCTG ATGCTGGCAT TAGTCTTGTT GGCTTGTCTA
ACGGCCTATG CACAACAGAC TTGGGAGGAT AAGTCTTCTG CGGTTCGTGC GATTCGAGTG
CGACCACTAT CGGCGTCAAT GTTATTGCTT GCCTTCATTG TTTTGTTTAT TCAGGTTTTT
TTAGGCGCCT GGGTGAGTAC TAACTATGCG GTCTTGGCCT GTCCAGATTT TCCGACTTGT
TTGGGAAATG CCTGGCCAGA AACAAATTGG GGTGAGGGTT TTACGCTTTG GCGCCAATTA
GGTTTGAATG CTCAGGGCGA ATTTATCTCC CCCGCAGCCT TACAAACCAT TCATTGGGCG
CATCGATTAT TTGCGGTGCT AGTGCTGGTA GTGTTGGGCT TTTTGGGTGT GAGGGCCCTT
CAGCTGGCAA CGCCGGTTCT ATCAGGCTTA AATCAGATTG CCCAGCTTTT GCTAGGAGTG
TTGCTACTGC AGGTAGTGAC CGGTATTTCA AATGTGGTGT TTCAATGGCC TTTGTTGGCG
GCTTTATTGC ATACCGCTGG CTCTGCTGCT TTGGTATTCT GTTTGGTCAG AATGAGTTAT
TGGGCTTCTT GGAGGCCTTT TATTCAAAAG AAGATGGCGT AA
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| Protein sequence | MPSLILFLEL AAIAIVFAGL PLLYLWRKPG YSFFQKLNWL LVFMTFDLIV FGAFTRLTDS
GLGCPDWPGC YGASNPLHAL NDIREAENAL PTGLVTVIKA WIEMIHRYLA MTVGALILMQ
VSIAFTKLKS VGKKPLFGSL GLLVLVCVQG AFGAWTVTLK LQPIIVTVHL MLALVLLACL
TAYAQQTWED KSSAVRAIRV RPLSASMLLL AFIVLFIQVF LGAWVSTNYA VLACPDFPTC
LGNAWPETNW GEGFTLWRQL GLNAQGEFIS PAALQTIHWA HRLFAVLVLV VLGFLGVRAL
QLATPVLSGL NQIAQLLLGV LLLQVVTGIS NVVFQWPLLA ALLHTAGSAA LVFCLVRMSY
WASWRPFIQK KMA
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