| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1626 |
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| Symbol | |
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| ID | 6183193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1428790 |
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| End bp | 1429434 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672144 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001798314 |
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| Protein GI | 171464201 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.724625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTAG TTGCCTTTGA AAGAAGCGTA CAGGGAACGA GTGCGAGCCG CCGTCTGCGC
AATTCCGGAA AAACCCCGGG AATCGTTTAC GGTAGTAAAG ATCCAGCCTT GGTCATTGAG
TTAGACCACA ACGCATTGTT CCATGCTCTC CGTAAAGAAG CATTTCACTC ATCCATTTTG
GATTTGGAAA TTGGTGGCAA GACACAAAAA GTGTTGTTGC GCGATTACCA AATGCATCCA
TTTAAGCCAT TGGTATTGCA CATTGACTTC CAACGCGTAT CCGCGACTAA GAAAGTTCAT
ATGCGCGTTC CATTGCACTT CACCAATGCT GACACTTCAG CTGCAGTGAA ATTGCAAGGC
GCAGTTATCA GTCACATCGC AACTGAACTC GAAGTATCTT ACTTACCGGC AGACTTGCCA
GAGTTCATCG AAGTGGACTT GGCTAAGATT GAAGTTGGTC ACGGTATTCA TGCTAAAGAC
ATCGCATTGC CAAAAGGCGT TACCTTGATA TTGCATGTTG AGCAAGAAAA CCCAGTACTT
GCTAACGCAC GTATCCCAGC AGTTAAAGCT GCTGAGCCTA CCGATACACC TGCAGCACCA
GCTGCTACAG CTCCTGCTGC TGATGCAACC AAGGTAATCA TTTAG
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| Protein sequence | MKVVAFERSV QGTSASRRLR NSGKTPGIVY GSKDPALVIE LDHNALFHAL RKEAFHSSIL
DLEIGGKTQK VLLRDYQMHP FKPLVLHIDF QRVSATKKVH MRVPLHFTNA DTSAAVKLQG
AVISHIATEL EVSYLPADLP EFIEVDLAKI EVGHGIHAKD IALPKGVTLI LHVEQENPVL
ANARIPAVKA AEPTDTPAAP AATAPAADAT KVII
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