| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1625 |
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| Symbol | |
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| ID | 6182950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1427688 |
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| End bp | 1428653 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641672143 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001798313 |
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| Protein GI | 171464200 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.765759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA CAAACGCTGA TTTATTAACT CTTTTCACAG GCAACGCAAA TCCCGTTTTG
GCCGAGGCTG TAGCCAAAGA ACTAAAACTC CCAATGGGAA AAGCCTTTGT AGGCCGCTTC
TCAGACGGTG AAATTCAAGT AGAAATTCAA GAAAACGTCC GCGGTAAGAA TGTCGTGGTC
ATCCAATCAA CCTGTGCGCC TACAAACGAC AGCCTGATGG AACTGATGAT CATGATTGAT
GCTCTAAAAC GTGCATCTGC AAGCCGCATA ACCGCAGTGA TTCCTTACTT CGGATATGCC
CGGCAAGACC GGCGCCCCCG TTCCGCACGC GTTGCTATCT CAGCACGCAT TGTGGCCAAC
ATGCTCCAAT CAGTTGCTGG CATCGAGTGT GTATTGACCA TGGATCTCCA TGCAGACCAA
ATTCAAGGTT TCTTTGACAT CCCCGTAGAC AACATTTACG CCTCCCCAGT CCTATTGGCT
GACCTACAGG CACAAAAGAC CCAAAAAGAC CTCATCATCG TGTCCCCAGA CATTGGCGGC
GTAGTACGCG CCCGAGCAAT GGCTAAGCAA TTGGGCACTG ATTTGGCAAT TATTGATAAA
CGCCGTCCTA AAGCGAACGT ATCTGAAGTA ATGCACCTAA TCGGTGAAGT AGAAGGCCGT
CACTGTGTGA TCATGGATGA CATCATCGAC ACAGGCGGAA CCCTCTGTAA AGCCGCTGAG
GCGCTTAAAG AGCGTGGCGC CAAGGGCGTT ACCGCCTACT GTACACATGC CGTGCTCTCA
GGTGGCGCCG TGGCTCGTAT TGCAGCTTCT GAGTTGGATG AGCTGGTTGT TACCGATACC
ATCCCTCTAA CCCCAGAAGC AATGAAAGTA TCCAAAATTC GCCAATTAAG CGTTGCACCG
ATCCTTGCTG AAACCCTGTC CCGCATTAGC AAAGGTGATT CAGTAATGTC GATGTTTGCC
GAATAA
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| Protein sequence | MSSTNADLLT LFTGNANPVL AEAVAKELKL PMGKAFVGRF SDGEIQVEIQ ENVRGKNVVV
IQSTCAPTND SLMELMIMID ALKRASASRI TAVIPYFGYA RQDRRPRSAR VAISARIVAN
MLQSVAGIEC VLTMDLHADQ IQGFFDIPVD NIYASPVLLA DLQAQKTQKD LIIVSPDIGG
VVRARAMAKQ LGTDLAIIDK RRPKANVSEV MHLIGEVEGR HCVIMDDIID TGGTLCKAAE
ALKERGAKGV TAYCTHAVLS GGAVARIAAS ELDELVVTDT IPLTPEAMKV SKIRQLSVAP
ILAETLSRIS KGDSVMSMFA E
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