| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1624 |
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| Symbol | ipk |
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| ID | 6182966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1426668 |
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| End bp | 1427558 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672141 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001798312 |
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| Protein GI | 171464199 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.431144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAATC TCGATTCTTT ATCTCTTCGC TCACCAGCTA AGCTCAATCT TTTTTTGCAT
ATCGTTGGTC GCAGGACTGA TGGTTATCAC CTGCTTCAAT CTGTCTTTCA ATTAATCGAT
TGGTGCGACA CGCTGCACTT GAAACGTATT TCTGAAAATG TAGTGCGGCG AATCAACCCA
ATTCCCGGAG TTGCACCAGA ACACGATCTA GTGGTTCGCG CAGCAAATTT ACTAAAAGAT
TTTTGCCAAT TTGAAGGCGG CGTTGAAATT AACCTGCAAA AAGAAATTCC GATGGGCGCT
GGTATGGGCG GAGGATCTTC AGACGCAGCG ACTACTTTGA TCGGACTTAA CGCCCTTTGG
AGTCTCAACC TTTCCAAAGA AACGCTTTGC GCCTTAGGCC TAAAGCTGGG AGCCGATGTT
CCATTCTTTA TTTTTGGCAA AAATGCCTTT GTTGAGGGTG TCGGGGAGAA AATGCGAGAA
ATCTCCCTCG AAACCCCTGA TTTTTTGGTC ATATTTCCCA ACCGGGGAAT TGCAACCGCT
AGCATTTTTC AAGACCCGGA ATTGACCCGA GATCACGCTC AGATTACAAT TGATGGCTTT
CTTACATCGC CATTATTGTA TCAATCGAAT GATTGCCAAG CGGTAGCGAT GAGGATTTAC
CCAGAAGTGA AGCAAGCTTT GGATTGGATT ACCCAGGCAG TACCGGGCTC ACAGCCCCGT
ATGTCAGGCT CTGGAAGTAG TGTTTTTGCA GTCTTAGACT CTAAGACTGA CATCGCAAAA
CTAAAAAATT TTCTTCAAAA TCTTCCTAAA GGGTGGGTAG GTCGGGTTGT TCGGGGGCTA
AATAAAAACC CCGCTTACAA TTTGATTTCA TTTCTTCAGA TTGACCTGTA G
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| Protein sequence | MVNLDSLSLR SPAKLNLFLH IVGRRTDGYH LLQSVFQLID WCDTLHLKRI SENVVRRINP
IPGVAPEHDL VVRAANLLKD FCQFEGGVEI NLQKEIPMGA GMGGGSSDAA TTLIGLNALW
SLNLSKETLC ALGLKLGADV PFFIFGKNAF VEGVGEKMRE ISLETPDFLV IFPNRGIATA
SIFQDPELTR DHAQITIDGF LTSPLLYQSN DCQAVAMRIY PEVKQALDWI TQAVPGSQPR
MSGSGSSVFA VLDSKTDIAK LKNFLQNLPK GWVGRVVRGL NKNPAYNLIS FLQIDL
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