| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1612 |
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| Symbol | |
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| ID | 6184225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1416764 |
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| End bp | 1417756 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672129 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001798300 |
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| Protein GI | 171464187 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0517] FOG: CBS domain
[COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCTA AAACTCGTGA ACGTACCCTA AAGCTTGCGC GCGACACCCT CACAATTGAG
GCTGCTGCAC TGCAAACAAT GCGTGATCGC CTGGAAGGGG TCAATGCTGA CGCCCTCATA
TTGGCAGTTG AACTATTACA TGGCTGCAAA GGCAGAATTG TGGTGTCCGG CATTGGTAAA
TCTGGCCACA TTGCCCGTAA GATTGCCGCC ACCTTTGCAT CCACCGGCTC ACCTGCCTTT
TTTGTCCACC CTGCCGAAGC CAGCCATGGC GATCTAGGCA TGGTCACTAG AGACGATGTT
TTTGTAGCGC TTTCTAACTC TGGCGAGACT GATGAGCTGC TGACTATTGT GCCGATTGTG
AAGCGTACTG GCGCAAAACT GATTGCCCTC ACTGGTGCAC CAAATTCCTC GCTTGCCAAA
TTGGCAGATG CTCACTTAGA TACCAGCGTT GAAAAAGAAG CTTGTCCATT AAATCTCGCG
CCCACTACCA GCACTACTGC AGCACTAGCA ATGGGCGACG CTTTAGCCGT TGCCTTGCTG
GATGCCAGAG GATTCGAAGC TGAAGATTTC ATTCGGTCTC ATCCCGGTGG CAGACTCGGC
CGGAAACAAC TCATGCATGT CAGTGAAGTG ATGCGCAATC TCGCTGAAAC ACCAAAGATT
TCTATCAACG CCCCACTCCA AGAGGCGCTG CTAGAGATGA CTGCAAAACG AATGGGCATG
GTGGTCATTT TGGATGACGA GCAAAAAGTA TTTGGCATTT TGACTGATGG TGACTTACGT
CGCTCATTGG AAAAGACAAC AAACCTTAGT GGCATCAAAC TCGAAAGTGT GACTACAGCG
GATCCTCGTA CCATCCCCGC GGAACTGCTG GCCGAAGAAG CGATCGAAAT GATGGAAAAA
CATCGCATAA ATCATTTAGT TGTTACTGAC AACAAAGGTC TTTTACTAGG CGCCCTAAAT
CTGCATGATT TATTTGCAGC CAAAGTTATT TAA
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| Protein sequence | MIAKTRERTL KLARDTLTIE AAALQTMRDR LEGVNADALI LAVELLHGCK GRIVVSGIGK
SGHIARKIAA TFASTGSPAF FVHPAEASHG DLGMVTRDDV FVALSNSGET DELLTIVPIV
KRTGAKLIAL TGAPNSSLAK LADAHLDTSV EKEACPLNLA PTTSTTAALA MGDALAVALL
DARGFEAEDF IRSHPGGRLG RKQLMHVSEV MRNLAETPKI SINAPLQEAL LEMTAKRMGM
VVILDDEQKV FGILTDGDLR RSLEKTTNLS GIKLESVTTA DPRTIPAELL AEEAIEMMEK
HRINHLVVTD NKGLLLGALN LHDLFAAKVI
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