Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1604 |
Symbol | |
ID | 6183517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1402706 |
End bp | 1406545 |
Gene Length | 3840 bp |
Protein Length | 1279 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641672122 |
Product | FAD linked oxidase domain protein |
Protein accession | YP_001798293 |
Protein GI | 171464180 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC CATTAGCTTT GAACCAGTTG TTGGACGCTG AGGCAGGCTC CCCCCGTCTG CGTGAAATTC CTTACAACTA CACCTCCTTT TCCGATCGAG AGATTGTTAT TCGCTTATTG GGCGAGGAGT CTTGGCGCGT ATTGAATAAC TTACGTGGCG TTCGCCGCAC AGGCCGTTCC GCACGGATGT TATTTGAAAT TCTCGGCGAT ATCTGGGTTG TTCAACGCAA CCCATTCTTA CAAGATGACT TGCTTGATAG TCCAAATCGT CGCAAACAGT TAATCGATGC GCTTTGGTAT CGATTGGGCG AGGTTAAGAA ACGTAATAGT GGTGATTCAG CAGATCAAGT AGAAATTTTA TTGAGTGCCG CTTATCGTGC CATTGAAAAT TTCGAAAACG GATTTAAAGA AGTTGAGCAA ATTCGTAAAC GTGCTCGTAA GGAATTAGGT CGTCATACCG CAGCGGACAA TATTTGTTTT GATGGTGTGT CGCGCGCTGC TCACGTTACC GATGCAACTG ACTGGCGCGT TGAGTTTCCG CTCGTTGTTT TAAAGCCAGA TTATGAATCT GAAATCCCGG GTTTAGTTAA AGCTTGTGTT GGATTGGGTT TGACAATTAT TCCTCGTGGA GGCGGTACTG GTTATACAGG CGGTGCAATT CCACTTTACG AAATGTCCGC GGTAATTAAC ACTGAGAAAC TGCAAGATAT TGGCGGCGTT AAATCCAAAA AGCTTCCTGG TTTAGATCGC GAAGTATCAA CGATTTTCAC GGGTGCAGGC GTGGTTACTC GGCGTGTTTC TGACGCTGCA GAGCTCGCCG GGCTTGTGTT TGCTGTTGAT CCCACATCTG CAGATGCTAG CTGTATTGGC GGCAATATCG CGATGAATGC TGGCGGTAAA AAAGCGGTTC TTTGGGGAAC TGCTTTAGAC AATCTCGCTA GCTGGCGCAT GGTCGATCCT GAAGGCAACT GGTTAGATGT TGAGCGTCTC GAGCACAACA TGGGCAAGAT CCATGATGTT GCAACAGTGC GCTTTCAATT GACTTGGTCT GATGGCAATA GCGAGCCAGG GCAACGCATT CTGAAAACAG AATTGTTAGA GGTTGAAGGT AGGTGTTTTC GCAAAGAAGG TTTAGGAAAA GACGTTACTG ATAAATTTTT ATCAGGATTG CCAGGTGTGC AAAAAGAAGG TTGTGATGGC TTGATTACCA GCGCAACTTG GGTATTGCAT CGCATGCCGA AATTTATGCG CACCATTTGT TTGGAGTTCT TTGGCCAAGC CCGCGAAGCC ATTCCGAGCA TTGTAGAAAT TAAAGCTTAC TTAGACGGCT TAAGTAAACA GGGTGGCCCA ATTCTGGCCG GTCTAGAACA TTTGGATGAT CGCTATTTAA GGGCTGTAGG TTATTCAACA AAATCGAAAC GCAATAGCTT GCCGAAGATG GTATTGATCG GTGACATTGC GGGTGATGAT GAGGAAGCGG TTGCTGCAGC CACTAGTGAA GTGGTGCGTA TGGCCAATTT ACGTGTTGGT GAAGGCTTTG TTGCAGTAAG TGCAGAAGCG CGCAAGAAAT TTTGGTTTGA TCGAGCCCGT ACAGCGGCGA TTGCCCGTCA TACCAACGCA TTTAAGATCA ATGAAGACGT TGTGATTCCT TTGCCACGCA TGGGCGAATA CACCGACGGC ATTGATCGCA TCAATATTGA ACTCTCTCTT AAAAATAAGC TGCAAGTGCT TGATGCCCTT GAGGCCTTCT TGAAAAAGAG CGCCTTACCA CTTGGTAAGA GTGATGCTGA GTATGAGATT CCAACAGCAG AAATCTTGGG TGATCGTGTT CAGCAAGCTT TAGATCTCAT TGCTAAAGTG CGTGGGCGTT GGGCTGAGTG GCTCACTGAG ATGGATTTAT ATTTCCCACG TTTGCAAAAT TACAGCTTGC GCGCCTCTTG GAAAGAGGAA GTGCGTTCAG AGTTGCGCAT CATCTTTGGC GGTTTGGCGT TTGAGCCTAT TCTCACTGAG TTAGAGGCCA TTCACAAAAA CATTTTGCGT AAGCGTGTAT TCGTAGCTTT GCATATGCAC GCTGGTGACG GTAACGTTCA TACCAACATT CCGGTGAACT CCGATGATTA CGAGATGTTG CAAGATGCCC ATCGCGCTGT AGATCGCATC ATGAAGTTAG CGCGCTCATT AGATGGTGTG ATCTCTGGTG AGCATGGTAT TGGTATTACC AAGCTAGAGT ATTTGACCGA AGCCGAATTA AAAGACTTCC GTAGTTATAA GAATCGTGTT GACCCAGAGG GCCGCTTCAA CAAAGGCAAG TTGATGCCCC ATGCCGATCT GAGTATGGCT TATACACCAA GCTTTGGCTT GATGGGTCAT GAGTCAATCA TCATGCAACA AAGCGATATT GGTGCGATTG CTGACAGCGT TAAAGATTGT TTGCGTTGTG GCAAATGTAA ACCTGTTTGC TCAACACATG TACCGCGTGC AAACTTACTC TACAGCCCGC GCGACAAGAT ATTAGGTACT TCATTGTTGA TTGAAGCCTT CTTGTACGAA GAGCAAACGC GCCGTGGTGT GTCGATTCGC CATTGGGAAA TGTTTGATGA CGTCGCTGCA CATTGCACCG TATGTCACAA GTGCTTAACG CCTTGCCCAG TCAAGATTGA CTTCGGTGAT GTGACGATGA ATATGCGTAA TCTCTTGCGC AAGATGGGTC AACAGCGTTT CAATCCAGGT ACTGTTGCAT CGATGTTCTT CCTCAATGCA ACTAGTCCAG AGACAATTCA TCTTGCCCGC AAGGCGATGA TTGGTTGGGG TTATAAGTTA CAGCGTTTAG GCAATGATGT ACTGCGTAAG TTTGCAAAAC AACAAACTGC ACACCCTCCA GCAACGGTAG GTAAACCAAG CGTTAAAGAG CAAGTGATTT TCTTTGTCAA TAAGAAGATG CCGGGTAATT TACCGAAGAA GACTGCACGC GCTTTATTGG ATATTGAAGA TGCAAACTAC GTACCGATTA TTCGCGATCC TAAGACTACT TCTGCAGATA CTGAAGCAGT ATTTTATTTT CCGGGTTGTG GATCTGAGCG TTTGTTCTCA CAAGTTGGTT TGGCAACGCA AGCAATGCTT TGGAATGTAG GTGTGCAAAC AGTTCTTCCT CCGGGTTATT TATGCTGTGG TTATCCACAG CGCGGTAATG GCGACTTTGA TAAAGCTGAG AAGATGATTA CGGATAACCG TGTGTTATTC CATCGTGTTG CCAATACCTT GAATTACCTG GATATCAAGA CCGTGGTTGT CTCATGCGGC ACTTGTTATG ATCAGTTGGC CGGCTATCAG TTTGAGCAGA TTTTCCCTGG CTGCCGAATT ATTGATATTC ATGAGTTCTT AGCTGAGAAG GGCGTCAAGC TCTCAGGCGT TACGGGCGTG AAGTATATGT ATCACGATCC TTGCCACTCT CCAATGAAGT TGCAAGATCC CCTTAAGATA GTGAACGAGT TAATTCAATT GGAGGATGGC AAAGCCATTG CCAAGAATGA TCGTTGTTGC GGTGAGTCTG GAACTTTGGC TGTGACTCGT CCTGATATTT CCACTCAAGT GCGTTTCCGT AAGCAGATTG AAATGGAAAA GGGTGCTAAT GATTTACGTA AAGGTGATTT CGCTGGCGAC GTTAAGGTGC TAACGAGCTG CCCATCATGC TTACAAGGTC TGACACGTTT TGATGCAGAT AGTGAGACGA CTGCTGATTA CATTGTGGTG GAAATGGCTC AGAAGCTGCT CGGTAAGGAT TGGGTGCAGG ACTACGTGGC CAAAGCAAAT CAAGGTGGTA TTGAGAGGGT TCTCGTTTAA
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Protein sequence | MNAPLALNQL LDAEAGSPRL REIPYNYTSF SDREIVIRLL GEESWRVLNN LRGVRRTGRS ARMLFEILGD IWVVQRNPFL QDDLLDSPNR RKQLIDALWY RLGEVKKRNS GDSADQVEIL LSAAYRAIEN FENGFKEVEQ IRKRARKELG RHTAADNICF DGVSRAAHVT DATDWRVEFP LVVLKPDYES EIPGLVKACV GLGLTIIPRG GGTGYTGGAI PLYEMSAVIN TEKLQDIGGV KSKKLPGLDR EVSTIFTGAG VVTRRVSDAA ELAGLVFAVD PTSADASCIG GNIAMNAGGK KAVLWGTALD NLASWRMVDP EGNWLDVERL EHNMGKIHDV ATVRFQLTWS DGNSEPGQRI LKTELLEVEG RCFRKEGLGK DVTDKFLSGL PGVQKEGCDG LITSATWVLH RMPKFMRTIC LEFFGQAREA IPSIVEIKAY LDGLSKQGGP ILAGLEHLDD RYLRAVGYST KSKRNSLPKM VLIGDIAGDD EEAVAAATSE VVRMANLRVG EGFVAVSAEA RKKFWFDRAR TAAIARHTNA FKINEDVVIP LPRMGEYTDG IDRINIELSL KNKLQVLDAL EAFLKKSALP LGKSDAEYEI PTAEILGDRV QQALDLIAKV RGRWAEWLTE MDLYFPRLQN YSLRASWKEE VRSELRIIFG GLAFEPILTE LEAIHKNILR KRVFVALHMH AGDGNVHTNI PVNSDDYEML QDAHRAVDRI MKLARSLDGV ISGEHGIGIT KLEYLTEAEL KDFRSYKNRV DPEGRFNKGK LMPHADLSMA YTPSFGLMGH ESIIMQQSDI GAIADSVKDC LRCGKCKPVC STHVPRANLL YSPRDKILGT SLLIEAFLYE EQTRRGVSIR HWEMFDDVAA HCTVCHKCLT PCPVKIDFGD VTMNMRNLLR KMGQQRFNPG TVASMFFLNA TSPETIHLAR KAMIGWGYKL QRLGNDVLRK FAKQQTAHPP ATVGKPSVKE QVIFFVNKKM PGNLPKKTAR ALLDIEDANY VPIIRDPKTT SADTEAVFYF PGCGSERLFS QVGLATQAML WNVGVQTVLP PGYLCCGYPQ RGNGDFDKAE KMITDNRVLF HRVANTLNYL DIKTVVVSCG TCYDQLAGYQ FEQIFPGCRI IDIHEFLAEK GVKLSGVTGV KYMYHDPCHS PMKLQDPLKI VNELIQLEDG KAIAKNDRCC GESGTLAVTR PDISTQVRFR KQIEMEKGAN DLRKGDFAGD VKVLTSCPSC LQGLTRFDAD SETTADYIVV EMAQKLLGKD WVQDYVAKAN QGGIERVLV
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