Gene Pnec_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1586 
SymbolanmK 
ID6183222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1386231 
End bp1387358 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content48% 
IMG OID641672106 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001798277 
Protein GI171464164 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00172032 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.54977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC CCAACTCCCT CTACATCGGC TTAATGTCCG GCACCAACCT AGATGGAATA 
GATGCCGTTC TCGCCAAGAT AGACCCCAAC GGGGAAGCAA GCGCTCTAGA CGCAGTAAGC
ACCCCTTTTA GCCCTGAGCT GCGCAAAGCC TTATTTGAGC TCCAAAGCCC CGGTCCGAAT
GAGCTTCACC GGGAGAAACA GGCTGGCAAT GCCTTGGCTA TCGCTTATGC AGATGCAGTC
AATCAGTTGC TCAAAAAAGC AAATTTGCAG GCTTCTGATA TTGCCGCGAT CGGCGCCCAT
GGACAGACCA TTCGCCACCA ACCCGAGTTA GGCGACATGG CCTACACCCA CCAAACACTT
AACCCTGTCT TATTGGCAGA AAAAACTGGT ATTGATGTGA TTGCCGATTT TAGAAGCCGA
GATTTAGCTG CCGGCGGTGA TGGCGCTCCT TTAGTACCAG CATTTCATGC GCAGCAATTT
GTAGAGGATA AAAATTTAGC AATCCTCAAT ATTGGCGGCA TCTCCAATTT CACGCTAATC
CCTATGAATG GTGAAGTCAC TGGCTTTGAT TGCGGTCCAG GAAATATATT GATGGATGCA
TGGATACACG AACATCAAGG TAATCCATTT GATAAAAACG GCAATTGGGC TTTGCAAGGG
AAAGTTAATG AAGCGCTATT GAAGCAAATG TTAGCTGACA CTTTCTTTGC AAAAGCTCCG
CCCAAGAGCA CTGGCAGAGA CGACTTCCAT CTGAGTTGGC TGCAAGAACA GTTGGGCAGT
GAAAATTATC TTTGTGAGGA TGTACAAGCC ACCTTGCTGC ACCTGACAGT GCACTCTGCC
CTAGAAGCTT TAGTACGCCA TGCCCCTCAA ACCCAGAGGA TAATTGTGTG TGGAGGCGGC
GCCAGAAATA ATGCCTTGAT GAATTTATTC AAAGTAAAAG CGCAACATTT CTTTAAGCAC
CCTCTAGAAA TTAACACTAG CGACGCTGTT GGAATAGATC CACAGCTAGT TGAAGGTCTT
GCCTTTGCAT GGCTTGCCTG GGCTCATAAA GAAAAACGGC CGGCAAATTT GCCAGCCGTT
ACAGGCGCAA AGGGTCCTAG AATTCTAGGT GCTTGTTATC CAGCCTAA
 
Protein sequence
MNKPNSLYIG LMSGTNLDGI DAVLAKIDPN GEASALDAVS TPFSPELRKA LFELQSPGPN 
ELHREKQAGN ALAIAYADAV NQLLKKANLQ ASDIAAIGAH GQTIRHQPEL GDMAYTHQTL
NPVLLAEKTG IDVIADFRSR DLAAGGDGAP LVPAFHAQQF VEDKNLAILN IGGISNFTLI
PMNGEVTGFD CGPGNILMDA WIHEHQGNPF DKNGNWALQG KVNEALLKQM LADTFFAKAP
PKSTGRDDFH LSWLQEQLGS ENYLCEDVQA TLLHLTVHSA LEALVRHAPQ TQRIIVCGGG
ARNNALMNLF KVKAQHFFKH PLEINTSDAV GIDPQLVEGL AFAWLAWAHK EKRPANLPAV
TGAKGPRILG ACYPA