| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1538 |
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| Symbol | |
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| ID | 6184604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1340569 |
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| End bp | 1342266 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672064 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001798236 |
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| Protein GI | 171464123 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATA TAAAGTCAGA ACCAAAAAAC ACTTTTTTGC GCCGTGCTTT GGCTGTTTGG
CTAATCTTCG GGCTTGCTTG TTCTGGATTT CCTGTATATG CCGCCCCTGC TGGAGACGTT
TCTGTAGAGG GTAATTCTGC TGCTATTCAG AATATTGGTA GAGCCATGCA GTCGCCTGAT
GCACGTCCCG CAAATGCGCC TACCCGTAGC TCCCTTCAAA GTCAGCCCAC TATTGTTCTG
CCGGACATGG GTGACCCGGG CGGCGACACC TTAAGCCGAG TGGATGAGCG TAAATATGGC
GAAATGATCA TGCGCCAGAT TCGTCCAGAT CCGGACTATT CAAATGATTT GCCCATCTAT
GATTTTCTCA ATCAGATGGA GCGTCGCTTA TTACAAGCGG CAAAAAAATT ACAGCTAGGC
GGCGCAAATG AGCAGGGTAG TGGCGCATAC AACTTCGAGG TGTTTGCTGT TAAGGACAGC
AGCATTAACG CATTTGCACT ACCCGGAGGA TTTATTGGTT TTCATACCGG CTTGATCGTA
AGTGCTGAAT CGGATTCCGA GGTGGCATCA GTCATGGGGC ATGAAACAGG TCACGTATTG
CAACGACACC TAGCCCGTCA GATGGATAAG CAAGCTACCA ATACGATGAT TGCCATTGCT
GGTATGGTGC TTGGTGCATT AGCGATGTCT CGTAACCCTC AGGCAGGGGC TAGCCTTATG
CAGGGCGGTC AAGCGGCGGC CATTAACAAC CAGCTTTCTT ATTCAAGAGA TGCAGAGCGT
GAAGCTGATC GTATTGGCTT TCAGATTTTG GACGCCAGTG GATACGATGT AAATGGTGCG
CCAGGTTTTT TCCAGCGCTT GCAAAAAGTT ACCGGAATTA TGGACAAAGG CGTACCAACC
TACGTGCGTA CTCACCCCCT AACGACTGAC CGTATTGCCG ATATGCAAGA TCGGGCCCGT
ACTGTAGCGT CACGAAATGT TCCTAGTTCA GTTGAGTTTT ATTTCATTAA GGCTCGGGCG
CGCATAGAGC AATCCGGCAG CTCTAGTGGG TCATATGATT TAAAAAATAC TTTTGATAGT
TTGAGTAAGC AGCCCCAAAT TGGAAAACAA TTGGAGGGCT TTTATGGTTT GACGCTGATT
GAGCAGCGCC AAGGAAAAGT AGATCAAGCT GAGGCCAATC TACAGCAAGC GCGTAACTTG
GCTCTGAAGG CAAGTGCACC AGGATCTTCT ATTCAGAGAC AAAGCCTTTC TTTAGATATC
ACCGCATCTG AATTGGCTTT AGCCAAAGGC AAAGGCGAGG AGGCGCTCCA AATTGCGCAG
GCAACTTTAC GTGCATATCC TCAATCGTAT GCAGCGGGTG CCGCAATGAT TAATGCTGAG
CTAAAACTCG GTCGGACTAA TGAGGCTATC GGTTGGCTAA AAGCTCGTAC AGGGTCTCAA
CCAAATGAAG TTGTTTGGTG GGCATTGCTG TCAAAGGCTT ATGATCAGGC TAAGAATGTT
CCTATGCGCC ATTACGCGCT TGGTGAAAAA TATGCGCTTG AGGGTGCTTG GCCTTCGGCG
ATTGAGCAGC TTCGCATTGC TCGCTCAGCT GGTGGTGCCG ATTTTTATCA AGGCTCGAGC
ATTGATGCCC GTTTACGCGA AATGCAAAGA CAGTATCAAG AAGAGCTTAA AGAGCAGGGC
AAGCAAATGC CGGGTTAA
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| Protein sequence | MQDIKSEPKN TFLRRALAVW LIFGLACSGF PVYAAPAGDV SVEGNSAAIQ NIGRAMQSPD
ARPANAPTRS SLQSQPTIVL PDMGDPGGDT LSRVDERKYG EMIMRQIRPD PDYSNDLPIY
DFLNQMERRL LQAAKKLQLG GANEQGSGAY NFEVFAVKDS SINAFALPGG FIGFHTGLIV
SAESDSEVAS VMGHETGHVL QRHLARQMDK QATNTMIAIA GMVLGALAMS RNPQAGASLM
QGGQAAAINN QLSYSRDAER EADRIGFQIL DASGYDVNGA PGFFQRLQKV TGIMDKGVPT
YVRTHPLTTD RIADMQDRAR TVASRNVPSS VEFYFIKARA RIEQSGSSSG SYDLKNTFDS
LSKQPQIGKQ LEGFYGLTLI EQRQGKVDQA EANLQQARNL ALKASAPGSS IQRQSLSLDI
TASELALAKG KGEEALQIAQ ATLRAYPQSY AAGAAMINAE LKLGRTNEAI GWLKARTGSQ
PNEVVWWALL SKAYDQAKNV PMRHYALGEK YALEGAWPSA IEQLRIARSA GGADFYQGSS
IDARLREMQR QYQEELKEQG KQMPG
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