| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1535 |
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| Symbol | |
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| ID | 6183649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1338467 |
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| End bp | 1339507 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672062 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | YP_001798234 |
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| Protein GI | 171464121 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGTA TTCTGATCAT CGCCCCAAAC TGGATTGGGG ATGCAGTGAT GACACAGCCT
TTGCTGGCGT CTCTTAAATC ACAATATCCA GAATCAACCA TTGATGTACT TGCGAGCACT
TGGGTTACAC CGATCTATCG TGCTTGTGCC GAAGTAAATG ATGTCCTTGA AGCAAAGTTT
GAGCATAAGC AATTGCAGTG GGGCTTACGC AAGCAGTTAG CCAAAGAGCT GGCCGCAAAA
AAATATCAAG TGTGTTTTGT ATTACCTAAT AGCTTGAAGT CAGCGCTGAT TCCTTGGCTT
GCCAATATTC CCTTTCGAGT TGGCTATCGT GGTGAGTTGC GATTTGGTCT AATTAACGTT
GCTTTAGACA ACCCAAGCAA GGTCAATCGC CCACCCATAG TCGAACACTA CCTTCAATTG
GGCCGGCTTT TAAATAACGA GCGGACTTCA CCAACCACCG CCAATCTCAC ACCCCAGTTA
AATGTATCCG CTGAAGCTAC TCACTCAGTA GAAACAAAAT TAACAAATAT TCATATTGAT
CAAGCGAACA TTTATGTAAT GTGTCCCGGG GCTGAATATG GCCCAACTAA GCGCTGGCTG
ACCAGTCATT TTGCGCAATT AACGGAAGGT TTGATCGCCA ATAATCCAAA TAATCAAATC
GTTCTTTTGG GCAGTAAAGG CGATTACACA CTTGGCAGTG AGATTCAAGC TCAAGCCAAG
CAGAACGATC ATATTCATAA CTGGTGTGGC GACACGTCTC TTGATGAAGC GATTGCTCTC
ATAGGAATGA GCAAAGCGGT CATTAGCAAT GATTCCGGCT TAATGCATAT TGCAGCCGCC
CTCAAAACTC CGCAAGTTGC TATTTTTGGA TCGAGTGATC CAGCCCATAC GCCACCCCTA
TCCGACAAAG CCAAAGTCAT TTGGCTCAAT TTACCATGCA GTCCGTGTCA CAAAAGAGAG
TGTCCACTAA AGCATTTAAA GTGCTTAAAT AACATCTTGC CTGCACAGGT ATTGTCCACA
CTGAGCACAT TGCAGCCCTA A
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| Protein sequence | MHGILIIAPN WIGDAVMTQP LLASLKSQYP ESTIDVLAST WVTPIYRACA EVNDVLEAKF
EHKQLQWGLR KQLAKELAAK KYQVCFVLPN SLKSALIPWL ANIPFRVGYR GELRFGLINV
ALDNPSKVNR PPIVEHYLQL GRLLNNERTS PTTANLTPQL NVSAEATHSV ETKLTNIHID
QANIYVMCPG AEYGPTKRWL TSHFAQLTEG LIANNPNNQI VLLGSKGDYT LGSEIQAQAK
QNDHIHNWCG DTSLDEAIAL IGMSKAVISN DSGLMHIAAA LKTPQVAIFG SSDPAHTPPL
SDKAKVIWLN LPCSPCHKRE CPLKHLKCLN NILPAQVLST LSTLQP
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