| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1518 |
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| Symbol | groEL |
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| ID | 6183384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1322998 |
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| End bp | 1324641 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672048 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001798220 |
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| Protein GI | 171464107 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000106639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.660636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGACGTTGT ATTTGGAGAT AGCGCCCGGA CTAAGATGGT CGAGGGCGTA
AATATTCTTG CTAATGCAGT GAAAACAACT TTGGGACCAA AAGGCCGCAA TGTAGTAATT
GAACGTTCAT TCGGTGGACC AATAATCACT AAAGACGGTG TATCCGTTGC AAAAGAAATC
GAACTCAAAG ACAAGCTTCA AAACATGGGT GCGCAGATGG TTAAGGAAGT TGCTTCCAAA
ACTGCTGACA TCGCTGGTGA CGGTACGACT ACCGCTACTG TTTTGGCGCA GTCTATCGTT
CGCGAAGGTA TGAAATATGT AGTTTCAGGC TATAACCCAT TGGACTTAAA GCGCGGTATC
GATAAGGCTG TAACAGCTGC AATCGAAGAG CTCGCAAAAA TTTCTAAGCC TTGCACGACC
ACTAAAGAAA TCGCTCAAGT AGGTTCTATT TCTGCAAACA GCGACCAAAG TATTGGTCAG
CGTATTGCAG AAGCGATGGA AAAAGTAGGT AAAGAAGGTG TTATTACTGT TGAAGACGGT
AAGTCTTTAG AAGACGAGCT TGAAGTAGTT GAGGGTATGC AGTTTGATCG CGGCTACCTC
TCTCCATACT TCATTAACCA ACCAGAAAAA CAAGTTGCTG TATTGGAAAG CCCATATGTT
CTGTTGTTTG ACAAGAAGAT TGCCAACATC CGCGATTTGC TCCCAGTACT CGAGCAAGTA
GCTAAGTCTG GTCGTCCATT ATTAATCATT GCAGAAGATG TTGAAGGTGA AGCCTTGGCA
ACTTTGGTTG TGAACAACAT CCGCGGCATT ATCAAAACTT GCGCCGTTAA AGCCCCTGGT
TTCGGCGATC GTCGTAAAGC CATGCTGGAA GACATCGCGA TTTTGACTGG CGGTATAGTA
ATCGCTGAAG AAATCGGCCT CACACTTGAA AAAACTACTC TTGAGCATTT GGGTCAAGCC
AAGCGCCTCG AAGTAGGCAA AGAAAACACC ATCATCATTG ACGGTGCTGG CGATGCTAAA
GCGATTGAAG CTCGTGTGAA GAACATTCGT GTTCAGGTCG AAGAAGCAAC CAGTGACTAC
GACAAAGAAA AATTGCAAGA ACGTGTAGCC AAGTTGGCTG GCGGTGTTGC GGTAATTCGT
GTTGGCGCAG CTACTGAAGT AGAAATGAAA GAAAAGAAAG CTCGTGTTGA CGATGCATTG
CATGCAACGC GTGCAGCTGT GGAGGAGGGT ATTATTCCTG GCGGCGGCGT AGCGTTGATT
CGCGCAATGC AAGGCATCAA AGGTCTGAAA GGCGACAACG CTGATCAAGA CGCTGGTATC
AGCATCGTAT TGCGCGCTAT GCAAGAGCCA TTGCGTACTA TCGTTAGCAA TGCTGGAGAA
GACGCAGGCG TGGTTGTTAA CGCTGTTCAA GCAAGCAAAG GTAATAACGG TTACAACGCT
GCTACCGGTG AATACGGCGA CCTCGTTGCA CAGGGCGTTA TCGACCCAAC CAAGGTAACT
AAAGCTGCAT TGGTAAATGC GGCTTCAGTT GCTGGCCTCT TGTTGACTAC TGATTGCGCA
ATTTCTGAAG CGCCAAAAGA TGAGTCTGCT GGTGGCGGTA TGCCTGATAT GGGCGGCATG
GGTGGTATGG GCGGCATGAT GTAA
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| Protein sequence | MAAKDVVFGD SARTKMVEGV NILANAVKTT LGPKGRNVVI ERSFGGPIIT KDGVSVAKEI
ELKDKLQNMG AQMVKEVASK TADIAGDGTT TATVLAQSIV REGMKYVVSG YNPLDLKRGI
DKAVTAAIEE LAKISKPCTT TKEIAQVGSI SANSDQSIGQ RIAEAMEKVG KEGVITVEDG
KSLEDELEVV EGMQFDRGYL SPYFINQPEK QVAVLESPYV LLFDKKIANI RDLLPVLEQV
AKSGRPLLII AEDVEGEALA TLVVNNIRGI IKTCAVKAPG FGDRRKAMLE DIAILTGGIV
IAEEIGLTLE KTTLEHLGQA KRLEVGKENT IIIDGAGDAK AIEARVKNIR VQVEEATSDY
DKEKLQERVA KLAGGVAVIR VGAATEVEMK EKKARVDDAL HATRAAVEEG IIPGGGVALI
RAMQGIKGLK GDNADQDAGI SIVLRAMQEP LRTIVSNAGE DAGVVVNAVQ ASKGNNGYNA
ATGEYGDLVA QGVIDPTKVT KAALVNAASV AGLLLTTDCA ISEAPKDESA GGGMPDMGGM
GGMGGMM
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