Gene Pnec_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1511 
Symbol 
ID6183268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1315796 
End bp1317247 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content45% 
IMG OID641672041 
Productadenylosuccinate lyase 
Protein accessionYP_001798213 
Protein GI171464100 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.411987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGTTTG CTGGACTCCC AAACGCATTA AAATTAGCTT TTATTGACAT CTTCAATGCA 
AAGGCAATAT TCGTGAGTCG GCCGCTTTCT ACCCTTAATG CTCTTTCTCC TTTAGACGGT
CGTTATGCCG GAAAACTGGA TGCTTTGCGC CCTTGGCTTT CGGAAGCGGC TTTCATGCGT
CAGCGTGTGT TTGTGGAAAT TCATTGGCTT TTGATTTTAG CGGCCGCTGG CTTGCCGGAT
GTGCCAAAAA TTAATGCTAC TGATGAAGCT TTTTTGTTAT CTCTGCCTGA GAATTTCTCT
GATGAAGATG CGCAGCGCAT TAAAGATATC GAAGCAGTTA CCAATCACGA TGTAAAAGCA
GTTGAGTACT TCTTAAAAGA AAAAGTGGCA GGGCGCCCTG ATTTATTAAA AGCAAGTGAG
TTCATTCATT TTGCTTGTAC CTCTGAAGAC ATCAACAATA CTTCACATGG CTTGATGTTG
CGCGGCGCAC GTGATGACGT GCTGTTGCCT CAGCTTCGCA AGGTTCTTTC TGTGCTTACT
GACTTAGCGA TTGAACACGC TAAGGTTCCA TTACTTTCTC GTACGCATGG ACAACCTGCT
TCACCGAGCA CGCTTGGAAA AGAAATTGCA AATATCGCTA AGCGATTAGA GCGTGCGATT
GATGTAATTG CAGCGGTGCC ATTGCTCGGC AAGATGAATG GTGCAGTTGG TAACTACAAC
GCCCACTTAT CGGCTTATCC TGATTTTGAT TGGGAGAACT TCTCTAAGAA TGTGGTAGAA
AAGCGCTTGG GTCTTACCTT TAACCCGTAC ACCATTCAGA TCGAGCCACA TGATGGCATG
GCGCAACTAT TTGATGCGAT TGCACGTGCC AATACGATTC TCTTGGATAT GGACCGAGAC
TTCTGGGCTT ATATTTCTGT TGGCTACTTT AAGCAACGCA CTAAAGCAGG TGAGATTGGT
TCTTCCACTA TGCCGCATAA AGTCAACCCA ATTGACTTTG AAAACTCTGA AGGTAACTTA
GGTGTTGCTA ATGCCTTGCT GCGCCATCTC GCAGAAAAAT TACCTATCTC TCGTTGGCAG
CGTGATCTCA CAGACTCTAC TGTCTTGCGT AACTTGGGCC CTGCATTTGG TCATAGTGTT
TTGGCTTACG ACAGTGCTTT ACGTGGATTG GGCAAGTTAG AAGTAAATCT CACAGCAATT
GCTGCTGATT TGGATTCTTG TTGGGAAGTG TTGGCTGAGC CAGTGCAGAC CGTAATGCGT
CGTTACGGTA TTGAGAATCC CTACGAGCAG CTTAAAGAGT TGACGCGTGG CAAAGACATT
AATCAAGCAG ATTTACAAAT CTTTATCCGT GGCTTGAAGA TTCCCGAAGA TGCAAAAGCG
CGTTTATTGG AGATGACCCC CTCTTCTTAT TTAGGCAAGG CGGTTGAGTT AACCGAACGT
CTTAAAAAGT GA
 
Protein sequence
MGFAGLPNAL KLAFIDIFNA KAIFVSRPLS TLNALSPLDG RYAGKLDALR PWLSEAAFMR 
QRVFVEIHWL LILAAAGLPD VPKINATDEA FLLSLPENFS DEDAQRIKDI EAVTNHDVKA
VEYFLKEKVA GRPDLLKASE FIHFACTSED INNTSHGLML RGARDDVLLP QLRKVLSVLT
DLAIEHAKVP LLSRTHGQPA SPSTLGKEIA NIAKRLERAI DVIAAVPLLG KMNGAVGNYN
AHLSAYPDFD WENFSKNVVE KRLGLTFNPY TIQIEPHDGM AQLFDAIARA NTILLDMDRD
FWAYISVGYF KQRTKAGEIG SSTMPHKVNP IDFENSEGNL GVANALLRHL AEKLPISRWQ
RDLTDSTVLR NLGPAFGHSV LAYDSALRGL GKLEVNLTAI AADLDSCWEV LAEPVQTVMR
RYGIENPYEQ LKELTRGKDI NQADLQIFIR GLKIPEDAKA RLLEMTPSSY LGKAVELTER
LKK