| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1507 |
|---|
| Symbol | |
|---|
| ID | 6183848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 1311211 |
|---|
| End bp | 1311537 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641672037 |
|---|
| Product | preprotein translocase, YajC subunit |
|---|
| Protein accession | YP_001798209 |
|---|
| Protein GI | 171464096 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTA GTAACGCTTT TGCCCAAGCT CCTGCAGCGG GCGCAGATTC CGGTGGCTTG
ATGAGCTTCC TCCCTTTAAT TTTGATGTTT GCAGTTTTGT ACTTCATCAT GATTCGTCCA
CAAATGAAGC GTCAAAAAGA AACCAAGACC ATGCTCGAAG CATTGAGCGT TGGTGATAAA
GTAGTTACTG TTGGCGGCAT CATGGGCAAA GTAACAGCAC TAAAGGACCA GGTAGTTACT
GTTGAAATTT CTGCTGGCAC TGAAGTGCAA ATGCAAAAAG GCGCCATCAC TACAGTATTG
CCAAAAGGCA CACTGAAGTC TGCTTGA
|
|---|
| Protein sequence | MWISNAFAQA PAAGADSGGL MSFLPLILMF AVLYFIMIRP QMKRQKETKT MLEALSVGDK
VVTVGGIMGK VTALKDQVVT VEISAGTEVQ MQKGAITTVL PKGTLKSA
|
|---|
| |