| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1502 |
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| Symbol | |
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| ID | 6183834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1305001 |
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| End bp | 1305870 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672032 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001798204 |
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| Protein GI | 171464091 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.829406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA ATAACACTAC ACAAAATAAT AGCAACGCCC ACATTACTTT TATTGGTGGT
GGCAATATGG GGCGCGCCCT AATTAGCGGC CTCCTTGCCA ATGGTTTTGA ACCCGATCAG
ATCTCTGTTA TAGAGGCAAA TGCCACTACA GCCTTGAAAC TGTATGAAGA TTTTGGAGTG
CAGGGTATTG GCGCGCTTGA GCAAATCGCT TTTGACTTCG CTAAAAATAA TGTGGTTGTC
ATGGCAATCA AGCCACAAGA CTTTAATGTT GTGGCTAAGG GCTTAGCAGC AAAACTCAAG
CATGCTACAG CACCTGGCCC ACTCATTCTA AGTATCGCTG CGGGCATTCG CTTAAAAGAC
ATGAGTCGCT GGCTGGATCA CACACGCTGT GTTCGCGCCA TGCCAAATAC TCCAGCTTTG
ATTGGCAAAG GCATCACCGG ACTCTTTGCA GATGCGGCGG TTGATCAAGC AGACCGCGCA
CTAGCTGAAA CAATTTGTCA TGCAGTAGGT CAAGCAGTAT GGGTTTCTGA AGAGAAGTTG
ATGGATGCAG TTACCGCTGT TTCAGGCAGC GGACCTGCCT ATGTCTTTGC GTTTCTTGAA
GCGATGCAAT CTGCAGGGGA GAAGCTGGGT CTCGATGCAG CGACAGCGCG CAAGCTAGCT
TATGCGACCC TAGAGGGTGC CACTCAATTG GCTCATAACT CGGATGAGCA TGCCGGTGTT
TTACGCGAGA GAGTTACTTC TAAAGGCGGC ACCACTGCGG CCGCTTTAGA TGTGATGAGG
CAACAGGGCT GGCATGAGAT TTTAGAAAAA GCGATTGACG CAGCAAGTCA ACGTGGAAAA
GCCATGGGCG ACGAACTAGG TAAAACCTAG
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| Protein sequence | MSTNNTTQNN SNAHITFIGG GNMGRALISG LLANGFEPDQ ISVIEANATT ALKLYEDFGV
QGIGALEQIA FDFAKNNVVV MAIKPQDFNV VAKGLAAKLK HATAPGPLIL SIAAGIRLKD
MSRWLDHTRC VRAMPNTPAL IGKGITGLFA DAAVDQADRA LAETICHAVG QAVWVSEEKL
MDAVTAVSGS GPAYVFAFLE AMQSAGEKLG LDAATARKLA YATLEGATQL AHNSDEHAGV
LRERVTSKGG TTAAALDVMR QQGWHEILEK AIDAASQRGK AMGDELGKT
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