| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1484 |
|---|
| Symbol | dnaK |
|---|
| ID | 6184211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1283203 |
|---|
| End bp | 1285125 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641672018 |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_001798190 |
|---|
| Protein GI | 171464077 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.840075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGA TTATCGGTAT CGACTTAGGA ACCACGAATT CTTGCGTTTC AGTCGTTGAA
AACAATGCAC CAAAAGTTGT CGAGAATGCA GAAGGCGCTC GCACAACTCC ATCAATCATC
GCTTATGTTG AAGATGGCGA AGTATTGGTT GGTGCGCCCG CAAAGCGTCA GTCAGTAACT
AACCCTAAAA ACACCATCTA CGCGGTGAAG CGCTTGATGG GCCGTAAATT TACAGATCCT
GAAGTACAAA AAGACATTGG CCTGATGCCA TATGCAATTA TTCAAGCTGA TAACGGTGAT
GCTTGGGTTG AGGCGCGCGA TAAGAAAATG GCGCCACAAC AAGTGTCCGC TGAAATTTTG
CGTAAGATGA AAAAAACTGC CGAAGATTAT CTCGGTGAAG AAGTGACAGA GGCAGTGATT
ACTGTGCCTG CTTACTTCAA TGACAGCCAA CGTCAAGCGA CTAAAGATGC TGGCCGTATT
GCTGGCCTGG ACGTAAAGCG CATCATTAAT GAGCCTACTG CTGCTGCCTT AGCATTTGGC
TTAGACAAGC AAGATAAAGT TGATCGTAAG ATCGCTGTTT ATGACTTGGG TGGCGGTACA
TTTGACGTAT CGATCATTGA GATTGCTAAC GTTGACGGTG AGAAGCAATT TGAAGTTCTC
TCTACCAATG GCGACACATT CTTAGGTGGC GAAGACTTTG ACCAACGCAT CATTGATTGG
ATCATTGCTG AGTTCAAGAA AGAGCAAGGC GTTGATTTGA GCAAAGACGT ATTGGCATTG
CAGCGCTTAA AAGACGCTGC TGAAAAAGCA AAGATCGAAT TGTCATCTGC ACAACAAACA
GAAATCAATT TGCCTTATGT GACGGCTGAT GCTGGCGGTC CTAAGCATTT GAATTTGAAG
CTAACTCGTG CCAAATTAGA ATCTTTGGTA GAAGAGTTAA TCAACCGTAC GGCTGGCCCT
TGCTTAACTG CCATTAAAGA TGCTGGTGTA AGCGTGGCGA ACATCGACGA CGTGATTTTG
GTCGGTGGTC AAACTCGTAT GCCCGCAGTT CAGGACAAAG TGAAAGAAAT CTTTGGAAAA
GAACCGCGTA AAGACGTTAA TCCAGACGAA GCAGTTGCGG TTGGCGCTGC GATTCAGGGT
TCTGTGTTGT CAGGCGATCG TAAAGATGTG TTGCTCTTGG ACGTTACTCC ATTGTCATTG
GGTATCGAAA CCCTTGGCGG CGTGATGACC AAGATGATTC CTAAGAACAC AACGATTCCT
ACCAAGCACT CACAGGTTTA CTCTACTGCG GAAGATAACC AACCAGCTGT AACTATTAAG
TGCTTCCAGG GTGAGCGCGA GATGGCTGCT GCAAATAAAT TACTTGGTGA ATTTAACCTC
GAAGGTATTG CTCCTGCACA GCGTGGTATG CCACAAATTG AGGTGACTTT TGATATTGAT
GCCAATGGTA TTTTGCATGT AACAGCAAAA GACAAGAACA CTGGCAAAGA GAACAAGATC
ACCATCAAGG CAAACTCTGG CCTGACCGAA GAAGAAATTC AACGTATGGT TAAAGATGCT
GAAGCGAATG CTGCTGAAGA TAAGAAGGCA TTGGAGTTGG TTACTGCGCG CAATACTGCT
GATGCTTTGG CTCATTCAAC CAAGAAGGCT TTGGAAGAGC ACGGAGCTAG CTTAGAGGCT
ACCGAAAAAG AAGCGATCGA GGCTGCTTTA AAGGACTTGG ATGAAGCGAT CAAAGGTAGT
GACAAAGAAG CTATCGATAC TAAGACCGAA GCTCTGGGCA AGGCAAGTCA GAAGCTTGGC
GAAAAAGTCA TGGCTGCTGA GCAAGCTAAA GCTGGTGCCG CTCCAGGCGG TGCAGCTCCT
GGTACGGCTT CTGATGCAGA TGTTGTGGAT GCCGATTTTA AAGAGGTTGA TGACAAGAAG
TAA
|
|---|
| Protein sequence | MGKIIGIDLG TTNSCVSVVE NNAPKVVENA EGARTTPSII AYVEDGEVLV GAPAKRQSVT
NPKNTIYAVK RLMGRKFTDP EVQKDIGLMP YAIIQADNGD AWVEARDKKM APQQVSAEIL
RKMKKTAEDY LGEEVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG
LDKQDKVDRK IAVYDLGGGT FDVSIIEIAN VDGEKQFEVL STNGDTFLGG EDFDQRIIDW
IIAEFKKEQG VDLSKDVLAL QRLKDAAEKA KIELSSAQQT EINLPYVTAD AGGPKHLNLK
LTRAKLESLV EELINRTAGP CLTAIKDAGV SVANIDDVIL VGGQTRMPAV QDKVKEIFGK
EPRKDVNPDE AVAVGAAIQG SVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMIPKNTTIP
TKHSQVYSTA EDNQPAVTIK CFQGEREMAA ANKLLGEFNL EGIAPAQRGM PQIEVTFDID
ANGILHVTAK DKNTGKENKI TIKANSGLTE EEIQRMVKDA EANAAEDKKA LELVTARNTA
DALAHSTKKA LEEHGASLEA TEKEAIEAAL KDLDEAIKGS DKEAIDTKTE ALGKASQKLG
EKVMAAEQAK AGAAPGGAAP GTASDADVVD ADFKEVDDKK
|
|---|
| |