| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1483 |
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| Symbol | |
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| ID | 6182946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1281981 |
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| End bp | 1283102 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672017 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001798189 |
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| Protein GI | 171464076 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.387506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTAAAA GTAACCGCGA TTTTTATGAA GTACTTGGTG TAGCAAAAGG CGCTAACGAC
GAAGAGCTAA AAAAGGCTTA TCGCAAACTG GCAATGAAGT ACCACCCCGA TCGCAATCCC
GATAGCAAAA CATCAGAAGC TCAATTTAAA GAAGTTAAGG AAGCATACGA AACCTTAACC
GACCCCAATA AGCGCGCCGC TTATGACCAA TATGGTCATG CTGGGGTTGA CCCTTCCATG
GGCGGTGGTT TCGGTGGCGG TGGATTTGCT GATGCGTTTG GCGATATCTT CGGCGATATC
TTCGGACAAG GCGGAGGTCG TCAATCTGGT CCTCAAGTCT ATAAGGGTGC TGACTTGCGC
TACAACATGG ATATCACGCT TGAGCAGGCA GCGGAAGGAT ATACCACTCA AATTCGTGTG
CCAAGCTGGA GTAATTGCAA GCCGTGTCAC GGTACAGGTG CGGAGCCAGG ATCTAAGGCT
GAGACATGCA CCACTTGTAA TGGTCACGGT CAGGTACGCG TACAGCAGGG CTTTTTTTCA
ATGCAACAAA CTTGTCCTAA GTGTCGCGGC ACTGGCGAGT ACATTCCAAA GTCTTGCAAA
ACGTGTCATG GAACTGGAAA ACACAAAGAA CAAAAAACGC TCGAGATCAA AATACCTGCA
GGTATTGATG ACGGCATGCG CGTGCGTTCT GTTGGTAATG GCGAGCCCGG AATTAATGGT
GGCCCAGCGG GTGACCTCTA TGTAGAGGTG CGAGTGAAGC CTCATAAAGT ATTTGAGCGT
GATGGTAATG ATTTGCATGT TCAAATGCCA ATCTCTTTTG CGACTGCAAC GATTGGTGGT
GAAATCGAAG TGCCCACTTT GTCGGGCCGC GTAGAGTTTC CAATTCCCAA TGGTACGCAA
ACTGGTAAAA CATTTCGCTT GCGCAATAAA GGAATTAAAG GGTTGCGCTC AACTTTGGTA
GGCGATCTCT TTGTTCATGT TCTGGTCGAG ACGCCAGTGA AGTTGACTGA TGAGCAGAAG
AAACTGCTGC AGAAGTTTGA TGAAAGTCTG AAATCTGGCG GTGACAAACA TAGCCCTCAG
CAAAAGGGAT GGTTTGACAG TGTAAAGAGC TTCTTTAGCT AG
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| Protein sequence | MPKSNRDFYE VLGVAKGAND EELKKAYRKL AMKYHPDRNP DSKTSEAQFK EVKEAYETLT
DPNKRAAYDQ YGHAGVDPSM GGGFGGGGFA DAFGDIFGDI FGQGGGRQSG PQVYKGADLR
YNMDITLEQA AEGYTTQIRV PSWSNCKPCH GTGAEPGSKA ETCTTCNGHG QVRVQQGFFS
MQQTCPKCRG TGEYIPKSCK TCHGTGKHKE QKTLEIKIPA GIDDGMRVRS VGNGEPGING
GPAGDLYVEV RVKPHKVFER DGNDLHVQMP ISFATATIGG EIEVPTLSGR VEFPIPNGTQ
TGKTFRLRNK GIKGLRSTLV GDLFVHVLVE TPVKLTDEQK KLLQKFDESL KSGGDKHSPQ
QKGWFDSVKS FFS
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