| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1478 |
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| Symbol | |
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| ID | 6183633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1277686 |
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| End bp | 1278441 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672013 |
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| Product | Chromosomal replication initiator DnaA |
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| Protein accession | YP_001798185 |
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| Protein GI | 171464072 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAC CCTCGCTTCC AAAACAATTC GCGCTAGATA TCAGCCACTC ACCTAAAGCT
AGTTTAGAAA ACTATCTTCC TGGAAAAGAC CTTGCATTAG TTTCCGTCCT GCAAGAGATA
AAGCGCTCCT GGGCAACATC CAACTCCACA AGTGCTAGCA ATCCATTAAA TCGGCGCTGG
ATTTACTGGT GGGGGCCCCA GGGATCTGGG CGCACCCATT TACTAGAAGC AATAGGAAAC
GCAGCCAAAC ATGCCGGCCT AGAGCGTGTT GCTCTCACTC CATCAGAACC TGCTTCTTGG
ATTCGATTGG AAGAAAATAT TAGTACGCTC GCGCAAACCC ACATTCCTTC AATCATTACC
GTAGATGATG TGGACCAATT AGATGACCGC CTGGTGGGAT CCCTATTTCG CATCCTGAAT
GCCGTGCAAG CGAGCAAAGC GATTCACATT TTTATGGCTG GTACAGCTGC TCCTGTAAAT
TTAAAGCTTC GTGAAGACTT GCGAACTCGT CTGGGCTGGG GTTTGGTGTT TCAAACTCAG
CTTTTGGATG ATGATGAGAA AATACAAGCA TTGGGTGAAG CGGCTAAAGC TCGAGGGCTA
GTTTTATCGC CTGATGTATT ACCCTGGTTA TTAAGCTGTT TCTATCGAGA TATGCCCAGC
TTAATGGCCC TGATCGACGC CCTAGATGCT TACTCTTTAG AAACAAAACG TGCTGTAACC
TTACCGCTTG TACGCGAACT ATTGCAGCCT AAATAA
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| Protein sequence | MNTPSLPKQF ALDISHSPKA SLENYLPGKD LALVSVLQEI KRSWATSNST SASNPLNRRW
IYWWGPQGSG RTHLLEAIGN AAKHAGLERV ALTPSEPASW IRLEENISTL AQTHIPSIIT
VDDVDQLDDR LVGSLFRILN AVQASKAIHI FMAGTAAPVN LKLREDLRTR LGWGLVFQTQ
LLDDDEKIQA LGEAAKARGL VLSPDVLPWL LSCFYRDMPS LMALIDALDA YSLETKRAVT
LPLVRELLQP K
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