| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1449 |
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| Symbol | |
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| ID | 6182970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1251764 |
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| End bp | 1252705 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671986 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_001798158 |
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| Protein GI | 171464045 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.574415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATT CGAATAACGC AGAAATTTTG ATGGCCCAGC CGCGTGGATT TTGCGCGGGC
GTCGATCGTG CAATTAATAT TGTGAATGAA GCGCTTAATC GTTTTGGTGG GCCAATTTAT
GTTCGTCACG AAATTGTGCA TAACGTATAT GTAGTGAATG AACTGCGCGA TAAGGGTGCA
GTGTTTGTAG ATGAATTGCA TGAAGTTCCC AAGGGTGGCA TTGTTGTATT TAGTGCTCAT
GGTGTTTCTC AAGAAGTGCG TAAAGATGCT GAGGCAAGGG GTTTTCAGGT ATATGACGCC
ACATGTCCTT TGGTTACCAA GGTCCATCTT GAAGTTGTCA AAATGTGCAA AGAAGGTTTC
ACGGTTCTAA TGATTGGTCA TGCGGGGCAC CCTGAGGTTG AGGGAACGAT GGGGCAGGTT
AAAGAAGGCG TGTTCTTAAT TGAGAGGGTT GGAGATGTGA GTGCTTTGCC ATTTCCGACT
GATGAGAAAG TTGCATTTGT TACCCAAACG ACGCTTTCTG TAGATGAGAC CAAAGAAATC
GTTGAGGCCT TAACTAAAAA GTTTCCCAAT ATTGTTCAAC CTCGCAAACA AGATATTTGT
TACGCTACTC AGAATCGCCA AGATGCTGTG AAATTTATGG CACCTCAAGT TGAAGTGGTT
ATTGTGGTGG GCAGCACTAC AAGCTCGAAC TCTAATCGCT TGCGTGAGCT TGCTGAAAAG
CTTGGCGTAC CTGCTTACAT GGTTGACTCT CCGGAGCAAC TTAAACCAGA ATGGTTTGCA
GGCAAGAAGC GAGTCGGTTT GACTGCAGGG GCATCTGCGC CAGAGAGCTT GGCTCAGTCT
ATCGTTAGTC GCATCCAGGA GTTTGGTCCA CGACAAGTGC GTGCACTAGA TGGTGTGGTT
GAGGACATCA CATTTTCATT GCCTAAAAAT TTAGTTGATT GA
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| Protein sequence | MSDSNNAEIL MAQPRGFCAG VDRAINIVNE ALNRFGGPIY VRHEIVHNVY VVNELRDKGA
VFVDELHEVP KGGIVVFSAH GVSQEVRKDA EARGFQVYDA TCPLVTKVHL EVVKMCKEGF
TVLMIGHAGH PEVEGTMGQV KEGVFLIERV GDVSALPFPT DEKVAFVTQT TLSVDETKEI
VEALTKKFPN IVQPRKQDIC YATQNRQDAV KFMAPQVEVV IVVGSTTSSN SNRLRELAEK
LGVPAYMVDS PEQLKPEWFA GKKRVGLTAG ASAPESLAQS IVSRIQEFGP RQVRALDGVV
EDITFSLPKN LVD
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