Gene Pnec_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1442 
Symbol 
ID6183436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1244639 
End bp1245685 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content48% 
IMG OID641671982 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_001798154 
Protein GI171464041 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.995391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTGT CTTATCAAGT CACGCTCAAG ACGAGCGGCA AACAATTTAC TGTTAATCCA 
GATGAGAATC TCTTGGAGGC CGCTTTACGC CAGGGAATCA ACCTGCCCTA TGGCTGTAAA 
AATGGAGCCT GCGGCTCCTG CAAAGGAAAA GTTGTAGAAG GCCAAGCAAC TCATGGGCAA 
CATAGCGAAA GCGCCCTTTC CAAGGCAGAT CAAACAGCGG GTGGAATTCT ATTTTGCTGC 
TCCCACCCTC AATCCGATCT CCTCATTGAG GCACGTGAGG TTCAAGGGGC TGATGATATT 
GCCATTCGCA AGGTCCCTTG CCGCGTCAAC GCCATCAATA AACCTAGCAG CAATGTTGTT 
ATTCTGAAAC TGCAACTGCC TGCTGCTGAA CGTTTTCAGT TTCTGGCCGG GCAATATCTA 
GAGTTTCTTC TCAAAGATGG ACAGCGTCGT GCTTACTCGA TTGCCAATGC GCCCGAACAA 
GAAGGGCCAC TTGAACTACA TATTCGCCAC TTACCTGGTG GCTTATTTAC CGACTTTGTA 
TTTGGCGTCA CCACTCCCGC TTTAAAAGAA AAAGATATTC TGCGCTTTGA GGGGCCGCTC 
GGAAGCTTCT TTTTGCGCGA AGAATCTAAA AAACCCATCA TCTTTGTCGC CGCTGGTACA 
GGTTTTGCGC CTATCAAATC CATCATTGAA CAAATGCAGG TCAAGAAGAT TCATCGACCA 
ATTCATCTTT ACTGGGGTGG ACGTCGCCCT AGCGATTTGT ATTTAAGTGA CTTGTGCAAA 
TCCTGGGAAA AAGAAATTTC TGACTTCAAA TACATCCCGG TGATCTCAGA TGCACTGGCA 
GAAGATGACT GGCAGGGACG CACTGGTTTT GTACATCAAG CCGTGATGAC AGATCACCCC 
AACATGCAAG ACTTTCAAGT CTATGCCTGT GGAGCACCAG TGATGGTCAA TGCTGCAAGA 
AATGACTTCT CAGCAAAATG CCAGCTACCC GAAGAAGAAT TCTTTGCTGA CTCCTTCACT 
AGTGCCGCAG ATTTAGCGAC GGCTTAA
 
Protein sequence
MRVSYQVTLK TSGKQFTVNP DENLLEAALR QGINLPYGCK NGACGSCKGK VVEGQATHGQ 
HSESALSKAD QTAGGILFCC SHPQSDLLIE AREVQGADDI AIRKVPCRVN AINKPSSNVV 
ILKLQLPAAE RFQFLAGQYL EFLLKDGQRR AYSIANAPEQ EGPLELHIRH LPGGLFTDFV 
FGVTTPALKE KDILRFEGPL GSFFLREESK KPIIFVAAGT GFAPIKSIIE QMQVKKIHRP 
IHLYWGGRRP SDLYLSDLCK SWEKEISDFK YIPVISDALA EDDWQGRTGF VHQAVMTDHP 
NMQDFQVYAC GAPVMVNAAR NDFSAKCQLP EEEFFADSFT SAADLATA