Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1437 |
Symbol | alaS |
ID | 6184378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1237151 |
End bp | 1239775 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671977 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001798149 |
Protein GI | 171464036 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.738644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCT CCCAAATTCG CCAGGCTTAC CTGGATTTCT TTGCCCAAAA AGGCCACCAA ATCGTCCCAT CCAGTCCGGT AGTGCCGGGG GATGACCCAA CCCTGCTATT TACAAATGCG GGTATGAACC AGTTCAAGGA CGTGTTTTTG GGCTTTGATA AGCGTCCATA TAACCGCGCT ACCACTACCC AAAAGTGTAT CCGAGCAGGT GGAAAGCACA ATGATTTGGA TAACGTTGGC TATACCGCCC GTCACCACAC CTTCTTTGAG ATGCTCGGAA ATTTCTCCTT TGGAGACTAC TTCAAAAAGG ACGCTATTCA ATTTGCCTGG GATTTATTGA CCCAGATATT TAAGTTGCCC AAAGAAAAAC TCTTAGTTAC CGTTTACGCG GAAGACGATG AGGCGTTTGA GATTTGGAAT AAACAAATAG GTGTACCAGC AAATCGGATC ATTCGTATTG GCGATAACAA GGGTGCACGT TACGCATCAG ATAACTTTTG GATGATGGGT GACACAGGTC CCTGTGGACC ATGCTCCGAA ATTTTTTACG ATCACGGCGA TCATATTCCT GGTGGCCCTC CGGGAAGCCC AGATGAAGAT GGCGATCGCT ATATTGAGAT TTGGAATAAC GTTTTTATGC AGTTCAATCG CGACGAAGCC GGTGTGATGC ATCCGCTGCC GAAGCCGAGC GTGGATACGG GAATGGGCCT CGAGCGTATT GCTGCGGTAT TGCAGCACGT GCACTCCAAC TATGAAATCG ACCTCTTCGT CAATCTTCTT AAGGCTTCCA AGGAGGCGGT AGACGCTGCT GGTGGCGAAA ATTGTGATCC AGAGAGTCCA TCACTCAAAG TGATTGCCGA TCACATCCGT GTATGTAGTT TCATTGTGGT TGACGGTGTG ATTCCTGGTA ATGCTGGTCG AGGATATGTT TTGCGTCGTA TCGCACGTCG CGCCATTCGT CATGGCTATA AGTTAGGCGC GCGTAAACCA TTCTTCTATC AATTGGTACC AGCGCTTGTT AAAGAGATGA GTGATGCGTA TCCAGAATTA CGTGCCGCAC AAGATAAAGT TAGTGAAGTG ATTAAGCAGG AAGAAGAGCG CTTCTTCCAA ACGATTGCTA ACGGTATGGA AATTTTGGAT GGTGCTTTAG CTGGTGATGC AAAAGTAGTT GATGGTGAGA CTGCCTTCCG CTTACATGAC ACTTTTGGTT TTCCATTGGA TTTGACTACG GACGTTTGTC GTGAGCGCGG TGTCACTGTT GATGCAGATG GTTTTGATGT GGTAATGCAA AAGCAACGTG ACCAAGCAAG GGCGGCCGGA AAGTTCAAAG TGGCTCAAGG CTTAGATTAC AAAGGCAGGC CGACCCAGTT TTATGGTTAT GACACCTTAA AGCATGAGGG CGCAAAAGTG ACAGCCTTAT ACGTGGATGG TTCAGCGGTG CCATGCGTTA AAGCAGGGGA TGTTGCTGTG ATTGTTTTAG ATAACACCCC TTTCTATGCT GAATCAGGTG GCCAAGTTGG TGACAAAGGT GAACTTCGCA ACGAAAGCAT CCGCTTTGCA GTGGAGGGCA CCTTTAAGAT TCAGGCGGAT GTATTTGGAC ATCAAGGGGA AGTGCTTGAG GGTGAACTGA AGGTGGGCGA CGTGCTAAAT GCAATCGTTG ATACTCGGCA AAGAACCGAT ACGATGCGCA ATCACAGTGC AACGCATATC TTGCATAGGG CCTTGCGTGA AGTATTGGGT GATCACGTAC AGCAAAAGGG CTCTTTGGTA GATGCTGCTA AGACCCGCTT TGACTTTACG CATAACGCAC CGATTACTGT TGAGCAAATC CACCGCATTG AGGATATTGT TAACCGAGAG ATTTTGGAAA ATACAGCTAC CTCAGGCAAG GTTATGTCAT TGGATGATGC GCAAAAGACT GGGGCCATGA TGCTCTTTGG TGAGAAATAT GGTGATGAAG TGCGTGTTCT AGAGATTGGC TCTTCTAAAG AATTGTGTTG TGGTACGCAC GTCTCACGCA CTGGTGATAT TGGCAGCTTG AAGATTGTTT CCGAGGGCGG TGTTGCCGCT GGGATCCGCC GTGTTGAAGC GGTTACGGGC AATAACGCAC TGCATTTCTT GCAAGGTTTA GAGGATAAGG TCAATGAAGC TGCGGCGATT CTGAAAACTC ATCCTGGTGA TTTAGTGAAT CGCGTTGCGC AACTTCAAGA CAGTTTGCGT CAAGCAGAAC GTGAGCTAGA AAAGGTCAAT TCCAAGTTGG CCGCAAGTCA AGGCGATGAA TTAGCAGGTC AAGCAATTGA TGTAAATGGA ATCAAGGTGC TAGCTGCTCG TATTAATAGC GCTGATGCTA GCGTCTTGCG TAAAACGATG GATGCTCTTA AGGCAAAACT CAAGACTGCA GCCATTGTGT TGGCATCGGT TCAAGGCGAT AAGGTTAGCT TGATCGCCGG TGTGACAACG GATTCCATTG GCAAGATCAA GGCTGGTGAT CTGGTGAACT TTGTAGCTCA GCAGGTGGGC GGTAAAGGCG GCGGCAAACC AGAGATGGCG ATGGCGGGGG GAACTGATCC TAGCAAATTG GGCGTAGCTT TAGATGGCGT TAAAGATTGG GTGGCAAGTA AATGA
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Protein sequence | MKVSQIRQAY LDFFAQKGHQ IVPSSPVVPG DDPTLLFTNA GMNQFKDVFL GFDKRPYNRA TTTQKCIRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGDY FKKDAIQFAW DLLTQIFKLP KEKLLVTVYA EDDEAFEIWN KQIGVPANRI IRIGDNKGAR YASDNFWMMG DTGPCGPCSE IFYDHGDHIP GGPPGSPDED GDRYIEIWNN VFMQFNRDEA GVMHPLPKPS VDTGMGLERI AAVLQHVHSN YEIDLFVNLL KASKEAVDAA GGENCDPESP SLKVIADHIR VCSFIVVDGV IPGNAGRGYV LRRIARRAIR HGYKLGARKP FFYQLVPALV KEMSDAYPEL RAAQDKVSEV IKQEEERFFQ TIANGMEILD GALAGDAKVV DGETAFRLHD TFGFPLDLTT DVCRERGVTV DADGFDVVMQ KQRDQARAAG KFKVAQGLDY KGRPTQFYGY DTLKHEGAKV TALYVDGSAV PCVKAGDVAV IVLDNTPFYA ESGGQVGDKG ELRNESIRFA VEGTFKIQAD VFGHQGEVLE GELKVGDVLN AIVDTRQRTD TMRNHSATHI LHRALREVLG DHVQQKGSLV DAAKTRFDFT HNAPITVEQI HRIEDIVNRE ILENTATSGK VMSLDDAQKT GAMMLFGEKY GDEVRVLEIG SSKELCCGTH VSRTGDIGSL KIVSEGGVAA GIRRVEAVTG NNALHFLQGL EDKVNEAAAI LKTHPGDLVN RVAQLQDSLR QAERELEKVN SKLAASQGDE LAGQAIDVNG IKVLAARINS ADASVLRKTM DALKAKLKTA AIVLASVQGD KVSLIAGVTT DSIGKIKAGD LVNFVAQQVG GKGGGKPEMA MAGGTDPSKL GVALDGVKDW VASK
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