Gene Pnec_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1437 
SymbolalaS 
ID6184378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1237151 
End bp1239775 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content48% 
IMG OID641671977 
Productalanyl-tRNA synthetase 
Protein accessionYP_001798149 
Protein GI171464036 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.738644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT CCCAAATTCG CCAGGCTTAC CTGGATTTCT TTGCCCAAAA AGGCCACCAA 
ATCGTCCCAT CCAGTCCGGT AGTGCCGGGG GATGACCCAA CCCTGCTATT TACAAATGCG
GGTATGAACC AGTTCAAGGA CGTGTTTTTG GGCTTTGATA AGCGTCCATA TAACCGCGCT
ACCACTACCC AAAAGTGTAT CCGAGCAGGT GGAAAGCACA ATGATTTGGA TAACGTTGGC
TATACCGCCC GTCACCACAC CTTCTTTGAG ATGCTCGGAA ATTTCTCCTT TGGAGACTAC
TTCAAAAAGG ACGCTATTCA ATTTGCCTGG GATTTATTGA CCCAGATATT TAAGTTGCCC
AAAGAAAAAC TCTTAGTTAC CGTTTACGCG GAAGACGATG AGGCGTTTGA GATTTGGAAT
AAACAAATAG GTGTACCAGC AAATCGGATC ATTCGTATTG GCGATAACAA GGGTGCACGT
TACGCATCAG ATAACTTTTG GATGATGGGT GACACAGGTC CCTGTGGACC ATGCTCCGAA
ATTTTTTACG ATCACGGCGA TCATATTCCT GGTGGCCCTC CGGGAAGCCC AGATGAAGAT
GGCGATCGCT ATATTGAGAT TTGGAATAAC GTTTTTATGC AGTTCAATCG CGACGAAGCC
GGTGTGATGC ATCCGCTGCC GAAGCCGAGC GTGGATACGG GAATGGGCCT CGAGCGTATT
GCTGCGGTAT TGCAGCACGT GCACTCCAAC TATGAAATCG ACCTCTTCGT CAATCTTCTT
AAGGCTTCCA AGGAGGCGGT AGACGCTGCT GGTGGCGAAA ATTGTGATCC AGAGAGTCCA
TCACTCAAAG TGATTGCCGA TCACATCCGT GTATGTAGTT TCATTGTGGT TGACGGTGTG
ATTCCTGGTA ATGCTGGTCG AGGATATGTT TTGCGTCGTA TCGCACGTCG CGCCATTCGT
CATGGCTATA AGTTAGGCGC GCGTAAACCA TTCTTCTATC AATTGGTACC AGCGCTTGTT
AAAGAGATGA GTGATGCGTA TCCAGAATTA CGTGCCGCAC AAGATAAAGT TAGTGAAGTG
ATTAAGCAGG AAGAAGAGCG CTTCTTCCAA ACGATTGCTA ACGGTATGGA AATTTTGGAT
GGTGCTTTAG CTGGTGATGC AAAAGTAGTT GATGGTGAGA CTGCCTTCCG CTTACATGAC
ACTTTTGGTT TTCCATTGGA TTTGACTACG GACGTTTGTC GTGAGCGCGG TGTCACTGTT
GATGCAGATG GTTTTGATGT GGTAATGCAA AAGCAACGTG ACCAAGCAAG GGCGGCCGGA
AAGTTCAAAG TGGCTCAAGG CTTAGATTAC AAAGGCAGGC CGACCCAGTT TTATGGTTAT
GACACCTTAA AGCATGAGGG CGCAAAAGTG ACAGCCTTAT ACGTGGATGG TTCAGCGGTG
CCATGCGTTA AAGCAGGGGA TGTTGCTGTG ATTGTTTTAG ATAACACCCC TTTCTATGCT
GAATCAGGTG GCCAAGTTGG TGACAAAGGT GAACTTCGCA ACGAAAGCAT CCGCTTTGCA
GTGGAGGGCA CCTTTAAGAT TCAGGCGGAT GTATTTGGAC ATCAAGGGGA AGTGCTTGAG
GGTGAACTGA AGGTGGGCGA CGTGCTAAAT GCAATCGTTG ATACTCGGCA AAGAACCGAT
ACGATGCGCA ATCACAGTGC AACGCATATC TTGCATAGGG CCTTGCGTGA AGTATTGGGT
GATCACGTAC AGCAAAAGGG CTCTTTGGTA GATGCTGCTA AGACCCGCTT TGACTTTACG
CATAACGCAC CGATTACTGT TGAGCAAATC CACCGCATTG AGGATATTGT TAACCGAGAG
ATTTTGGAAA ATACAGCTAC CTCAGGCAAG GTTATGTCAT TGGATGATGC GCAAAAGACT
GGGGCCATGA TGCTCTTTGG TGAGAAATAT GGTGATGAAG TGCGTGTTCT AGAGATTGGC
TCTTCTAAAG AATTGTGTTG TGGTACGCAC GTCTCACGCA CTGGTGATAT TGGCAGCTTG
AAGATTGTTT CCGAGGGCGG TGTTGCCGCT GGGATCCGCC GTGTTGAAGC GGTTACGGGC
AATAACGCAC TGCATTTCTT GCAAGGTTTA GAGGATAAGG TCAATGAAGC TGCGGCGATT
CTGAAAACTC ATCCTGGTGA TTTAGTGAAT CGCGTTGCGC AACTTCAAGA CAGTTTGCGT
CAAGCAGAAC GTGAGCTAGA AAAGGTCAAT TCCAAGTTGG CCGCAAGTCA AGGCGATGAA
TTAGCAGGTC AAGCAATTGA TGTAAATGGA ATCAAGGTGC TAGCTGCTCG TATTAATAGC
GCTGATGCTA GCGTCTTGCG TAAAACGATG GATGCTCTTA AGGCAAAACT CAAGACTGCA
GCCATTGTGT TGGCATCGGT TCAAGGCGAT AAGGTTAGCT TGATCGCCGG TGTGACAACG
GATTCCATTG GCAAGATCAA GGCTGGTGAT CTGGTGAACT TTGTAGCTCA GCAGGTGGGC
GGTAAAGGCG GCGGCAAACC AGAGATGGCG ATGGCGGGGG GAACTGATCC TAGCAAATTG
GGCGTAGCTT TAGATGGCGT TAAAGATTGG GTGGCAAGTA AATGA
 
Protein sequence
MKVSQIRQAY LDFFAQKGHQ IVPSSPVVPG DDPTLLFTNA GMNQFKDVFL GFDKRPYNRA 
TTTQKCIRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGDY FKKDAIQFAW DLLTQIFKLP
KEKLLVTVYA EDDEAFEIWN KQIGVPANRI IRIGDNKGAR YASDNFWMMG DTGPCGPCSE
IFYDHGDHIP GGPPGSPDED GDRYIEIWNN VFMQFNRDEA GVMHPLPKPS VDTGMGLERI
AAVLQHVHSN YEIDLFVNLL KASKEAVDAA GGENCDPESP SLKVIADHIR VCSFIVVDGV
IPGNAGRGYV LRRIARRAIR HGYKLGARKP FFYQLVPALV KEMSDAYPEL RAAQDKVSEV
IKQEEERFFQ TIANGMEILD GALAGDAKVV DGETAFRLHD TFGFPLDLTT DVCRERGVTV
DADGFDVVMQ KQRDQARAAG KFKVAQGLDY KGRPTQFYGY DTLKHEGAKV TALYVDGSAV
PCVKAGDVAV IVLDNTPFYA ESGGQVGDKG ELRNESIRFA VEGTFKIQAD VFGHQGEVLE
GELKVGDVLN AIVDTRQRTD TMRNHSATHI LHRALREVLG DHVQQKGSLV DAAKTRFDFT
HNAPITVEQI HRIEDIVNRE ILENTATSGK VMSLDDAQKT GAMMLFGEKY GDEVRVLEIG
SSKELCCGTH VSRTGDIGSL KIVSEGGVAA GIRRVEAVTG NNALHFLQGL EDKVNEAAAI
LKTHPGDLVN RVAQLQDSLR QAERELEKVN SKLAASQGDE LAGQAIDVNG IKVLAARINS
ADASVLRKTM DALKAKLKTA AIVLASVQGD KVSLIAGVTT DSIGKIKAGD LVNFVAQQVG
GKGGGKPEMA MAGGTDPSKL GVALDGVKDW VASK