Gene Pnec_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1436 
Symbol 
ID6183332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1236909 
End bp1237154 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content46% 
IMG OID641671976 
ProductSirA family protein 
Protein accessionYP_001798148 
Protein GI171464035 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.324916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.46012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG CGGTCAATAT AGTCTTTAAT GCAGAGGTTG ATGCGATCGG AATGAATTGC 
CCATTGCCCA TCTTACGCAC CAAGAAGGCT TTGGCAACCA TGCAGTCAGG CGAAGTCTTA
AAGATTAAGG CAACTGATTC TGGCGCTGCT CATGACTTCT TGGCATTTGC CAAGCAAACT
GGCAATGAGT TAATTGCTAG TACTACTGAG GGTGATGTGT TGGTGTTTTT CATGAAGCGT
AGGTAG
 
Protein sequence
MSEAVNIVFN AEVDAIGMNC PLPILRTKKA LATMQSGEVL KIKATDSGAA HDFLAFAKQT 
GNELIASTTE GDVLVFFMKR R