| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1434 |
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| Symbol | |
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| ID | 6184298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1233042 |
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| End bp | 1235933 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671974 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001798146 |
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| Protein GI | 171464033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.02022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.262872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATG CCTCAAATAC CCCTAATTCA CCAGCGGCCA GCTCTGCAGA CGAGCTCGCC
AAATCCTACG AACCTGCCCC GATAGAGGCC TACTGGGGTC CAGAGTGGGA GCGCCGCGGA
ATTGCCGACG CCACCATGGA AGAAGATAAG GGTGATTTTT CCATTCAACT ACCTCCACCG
AACGTTACTG GCACCCTGCA CATGGGTCAC GCTTTTAATC AAACCATCAT GGACGGCTTG
GTTCGTCACG CTCGCATGTC TGGCAAAAAT ACTTTGTGGG TACCCGGCAC CGATCACGCT
GGCATTGCCA CACAAATTGT TGTTGAGCGC CAACCGGATG CGCAAAAGGT ATCTCGCCAT
GACTTGGGTC GCGAAAAGTT TCTAGAAAAA GTGTGGGAGT GGAAAGAAAC TTCCGGGAAC
ACTATTACGC GACAAATCCG TCGCCTCGGT GCGTCGATTG ATTGGGGTAA AGAATATTTC
ACAATGGACA GCAAAATGTC CAAGGCAGTG GTTGAAGTAT TTATACGCTT ACACGAACAA
GGATTGATTT ATCGCGGCAA ACGTTTGGTG AATTGGGACC CAGTTTTAGG CACTGCTGTT
TCTGACTTGG AAGTAGTGAG TGAAGAGGAA GATGGCTCGA TGTGGCATAT TCGCTATCCA
TTGACTGATG GTTCCGGTCA CCTCACCGTT GCCACCACTC GCCCAGAAAC CTTGCTGGGC
GACGTTGCCG TCATGGTGAA CCCGGAAGAC GAGCGTTACA AGCACCTGAT TGGTAAGTCA
GTTAATTTGC CTTTATGCAA TCGCACCATT CTGATTATTG CCGATGATTA TGTTGACTTG
AACTTTGGCA CGGGCGTAGT AAAAGTAACC CCCGCACATG ACTTTAATGA CTACGCGGTT
GGTCAACGCC ATCAACTACC GATGATTAAC ATTCTCACTT TGGACGTCAA GATTAATGAG
AATGCTCCTG CCGCCTATCA GGGCATGGAA CGTTTTGCAG CACGCAAGCA AGTTGTCGCC
GATTTGGAGG CTGCTGGCTT ACTTGAAAAA GTTCAGTCAC ATAAGTTGAT GGTGCCACGT
GGCGATCGCA CTCAAACCAT TACTGAGCCG ATGTTGACCG ACCAGTGGTT TGTGGCAATG
TCTAAACCAA GTCCAGACAA TAAATACCAA CCTGGATCAT CGATTGCTGG TGCAGCACTA
GATGCAGTGA CTAAAGGTGA CATCAAACTC GTTCCTGAAA ACTGGATCAA TACCTACACG
CAGTGGCTAG AAAATATTCA AGACTGGTGC ATCTCCCGCC AGCTCTGGTG GGGCCATCAA
ATCCCTGCTT GGTATGGTGA AGATGGGCAG ATTTTTGTAG GCCGTTCGGA GGAGGAGGTG
AAAGCGAAGG CAGCTGCCGC CGGCTATACC GGCAAACTCA ATCGCGATCC CGATGTGCTG
GATACCTGGT TCAGTTCTGC ACTCGTACCA TTTAGTTCAT TAGGTTGGCC TGATGAAACC
CCCGCCCTAA ATCACTTCTT GCCTTCATCC GTTTTAGTGA CCGGCTTTGA CATCATCTTC
TTTTGGGTGG CGCGGATGGT TATGATGACC TGCCACTTCA CCGGCAAGGT GCCATTCCAT
ACGGTTTATG TGCACGGCTT AGTACGTGAT GCTGAAGGCC AAAAGATGAG CAAATCGAAG
GGCAATACTT TGGACCCAAT CGACTTAATT GACGGCATTC AGATTGAAGA GCTAGTAGGC
AAGAGAACCA CCGGCCTCAT GAATCCTAAG CAAGCCGAGA GCATTAGCAA GAAGACCAAA
AAAGAATTTC CAGATGGCAT TCCGGCATTC GGCACAGATG CCCTGCGCTT TACCTTTGCC
TCTTTAGCCT CACTTGGTCG CAATATTAAT TTTGATCAAA AGCGCTGCGA AGGCTATCGC
AATTTCTGCA ACAAACTTTG GAATGCAACC CGATTTGTAC TGATGAACTG CCCTGGCAGT
GATGAAGCTA ATGGCTTAGC ACCCTGCGAT AACCAATGTG GTCCCGACGG CTATTTAGAT
TTTTCGCCTG CCGATAAATG GATTGTTTCC CAACTGCAAA GAACTGAGGC TGATGTTGCC
AAAGGTTTTG AAAACTATCG TTTTGACAAA ATTGCGAGCA GCATCTACCA ATTTGTTTGG
GATGAGTACT GCGATTGGTA CCTAGAACTC GCCAAGGTGC AACTGCAAAC CGGTACCCCA
GCACAGCAAC GCGCTACTCG TCGCACCCTG TTGCGTGTTT TAGAAACGAT CTTGCGACTG
GCGCACCCAT TAATTCCGTT CATCACTGAA ACGCTCTGGC AAACTGTTGG ACCTAAGTCC
GGCAAAGAGT TAGTCAAGCA AACAAAACAA ACGATTGCAC TTCAGCCCTA CCCAGTTTCT
CAGCCCGAAA AGATTGATGA ACAAAGCGAA GCCTGGGTTG CACAAATCAA AGCAATTGTC
GATGCCTGCA GAAACTTACG TGGCGAGATG CAAGTCCCTC CCGGCCAAAA AGTACCACTT
TGGATTTACA GTCCGGATGA ATTCTTAGTA AAAGCCACCC CTTATTTAAT GGCGCTAGCG
AAACTCACTG AAGTCAAAAT CTACAGCGAA GAAGCTGCGC TAGAAAAAGA TGCGCCTGGA
GCACCAATTG CCTTGGTGGG TGATATCAAA CTACTGCTCA AGATTGAGGT AGATGTTGCT
GCTGAACGCA TTCGTCTTGG TAAAGAGATC GAGCGTCTTG CAAATGAAAT CAACAAAGCT
AAGGGCAAAC TGACCAACGA AAGCTTTGTG GCACGCGCTC CGGCCGAGGT AGTTGCCCAA
GAAAAACAGC GTCTTGCTGG CTTTGAGCAA AATCATGAGA AGCTTGTTGC ACAATTAGAG
CGTCTGAAAT AA
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| Protein sequence | MPNASNTPNS PAASSADELA KSYEPAPIEA YWGPEWERRG IADATMEEDK GDFSIQLPPP
NVTGTLHMGH AFNQTIMDGL VRHARMSGKN TLWVPGTDHA GIATQIVVER QPDAQKVSRH
DLGREKFLEK VWEWKETSGN TITRQIRRLG ASIDWGKEYF TMDSKMSKAV VEVFIRLHEQ
GLIYRGKRLV NWDPVLGTAV SDLEVVSEEE DGSMWHIRYP LTDGSGHLTV ATTRPETLLG
DVAVMVNPED ERYKHLIGKS VNLPLCNRTI LIIADDYVDL NFGTGVVKVT PAHDFNDYAV
GQRHQLPMIN ILTLDVKINE NAPAAYQGME RFAARKQVVA DLEAAGLLEK VQSHKLMVPR
GDRTQTITEP MLTDQWFVAM SKPSPDNKYQ PGSSIAGAAL DAVTKGDIKL VPENWINTYT
QWLENIQDWC ISRQLWWGHQ IPAWYGEDGQ IFVGRSEEEV KAKAAAAGYT GKLNRDPDVL
DTWFSSALVP FSSLGWPDET PALNHFLPSS VLVTGFDIIF FWVARMVMMT CHFTGKVPFH
TVYVHGLVRD AEGQKMSKSK GNTLDPIDLI DGIQIEELVG KRTTGLMNPK QAESISKKTK
KEFPDGIPAF GTDALRFTFA SLASLGRNIN FDQKRCEGYR NFCNKLWNAT RFVLMNCPGS
DEANGLAPCD NQCGPDGYLD FSPADKWIVS QLQRTEADVA KGFENYRFDK IASSIYQFVW
DEYCDWYLEL AKVQLQTGTP AQQRATRRTL LRVLETILRL AHPLIPFITE TLWQTVGPKS
GKELVKQTKQ TIALQPYPVS QPEKIDEQSE AWVAQIKAIV DACRNLRGEM QVPPGQKVPL
WIYSPDEFLV KATPYLMALA KLTEVKIYSE EAALEKDAPG APIALVGDIK LLLKIEVDVA
AERIRLGKEI ERLANEINKA KGKLTNESFV ARAPAEVVAQ EKQRLAGFEQ NHEKLVAQLE
RLK
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