| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1402 |
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| Symbol | |
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| ID | 6183648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1200374 |
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| End bp | 1200937 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671945 |
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| Product | peroxiredoxin |
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| Protein accession | YP_001798118 |
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| Protein GI | 171464005 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.587584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATTA TCAATACCGT AGTTCAGCCA TTCAAAACCG AAGCTTTCCA CAATGGCAAG
TTCGTAACCA TTACTGATGA GAGCCTCAAG GGCAAATGGT CAGTTTTGAT TTTCATGCCA
GCAGCATTTA CATTTAACTG TCCAACAGAA ATTGAAGATG CGGCTGAGAA CTATGCTGAA
TTTCAAAAAA TGGGTGCCGA AGTGTATATC GTAACTACGG ACACTCATTT TTCCCACAAA
GTTTGGCACG AGACCTCTCC TGCAGTAGGA AAAGCAAAGT TCCCACTCGT TGGTGATCCA
ACACATACTT TGACCAATGC TTTTAGCGTT CATATTCCTG AAGCAGGCTT GGCATTGCGC
GGTACATTCA TCATCAATCC AGAAGGTGTG ATCAAGACAG CAGAAATTCA CTCCAATGAG
ATAGCCCGTG ATGTTTCCGA AACTTTACGT AAATTGAAAG CGGCACAGTA CACAGCAGCA
CATCCAGGTG AGGTTTGCCC TGCTAAGTGG AAAGAAGGCG CAGCAACATT GACACCTTCT
TTGGATCTCG TAGGCAAGAT CTAA
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| Protein sequence | MSIINTVVQP FKTEAFHNGK FVTITDESLK GKWSVLIFMP AAFTFNCPTE IEDAAENYAE
FQKMGAEVYI VTTDTHFSHK VWHETSPAVG KAKFPLVGDP THTLTNAFSV HIPEAGLALR
GTFIINPEGV IKTAEIHSNE IARDVSETLR KLKAAQYTAA HPGEVCPAKW KEGAATLTPS
LDLVGKI
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