| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1363 |
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| Symbol | |
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| ID | 6182937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1174426 |
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| End bp | 1175901 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671915 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001798088 |
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| Protein GI | 171463975 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.41805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGT TTGGTCACAA AAAAGGGGAA ACCATGGGAC TTACCGTGGG GAGTAATCGA
GATAACTTCA ATTACAAAGT TATCAGCCAA TTTGCCATCG TTACTGTGCT TTGGGGAATC
GTTGGCATGC TTGTGGGGGT CATCCTCGCA GCCCAGTTAA TCTGGCCTGA AATCACTTTT
AATATCCCTT GGTTGAGTTA TGGTCGCTTG CGCCCATTGC ATACCAATGC GGTGATTTTT
GCTTTCGGTG GATCGGCGTT GTTTGCAACG TCCTATTATA TTGTTCAGCG TACGTGCCAA
GTGCGACTCT TCTGTGACAA ATTAGCGGCA TTTACCTTCT GGGGTTGGCA GGCGGTGATT
GTCTCTGCTG CAATTACATT GCCATTGGGT ATTACCACCT CAAAAGAGTA TGCTGAACTT
GAGTGGCCCA TCGACTTGTT AATCACTGTG GTTTGGGTGG CTTATGCAGT TGTGTTTTTT
GGTACTGTAA TTAAACGTAA GACTAAACAT ATCTACGTAT CGAACTGGTT CTTTGGCGCA
TACATTTTGA CAATTGCCGT ATTACATATT GTCAATAACG TTGAGATGCC AGCTAGCTTA
TTGAAGTCAT ATTCAGCTTA TGCTGGTGCA CAGGATGCAA TGATTCAATG GTGGTATGGT
CACAATGCAG TAGGCTTTTT CTTGACCACC AGCTTCTTGG GCATGATGTA CTATTTCATT
CCAAGGCAAG CTGAGCGCCC AATTTACTCA TATCGCTTAT CCATTGTTCA CTTTTGGGCT
TTGAATTTCA CCTATATGTG GGCAGGCCCT CATCATCTGC AGCACACCGC ATTACCTGAC
TGGACTCAGT CTTTGGGTAT GGTGTTCTCC TTGATCCTGT TGGCTCCATC TTGGGGTGGC
ATGATCAACG GCATCATGAC TCTATCTGGT GCGTGGCATA AATTACGTCG CGACCCAATC
TTGAAGTTCT TGGTAGTGGC ATTGTCTTTC TACGGCATGT CTACTTTCGA AGGCTCCATG
ATGTCTATTA AGACGGTAAA TAGCTTGTCT CACTACACAG ACTGGACCAT TGGTCACGTT
CACTCAGGCG CTTTGGGTTG GGTTGCCATG ATCACTATTG GTTCCTTGTA CTACCTCATT
CCACGTTTAG TTGGTCAAAG AGATATGTAC AGCACGAAGT TAATTGAATT GCATTTCTGG
ATCGCAACTA TTGGCGTGGT GATTTATATC GCTGCTATGT GGATTGCCGG CGTAATGCAA
GGTTTGATGT GGAGGGCGTT TGAACCAGAC GGTACTTTGA CTTATAGCTT TGTTGAGTCT
GTTAAAGCTA CTTATCCATC CTATGTAATT CGTTTATTGG GCGGCTTGTG CTACCTAAGC
GGCATGTTTG TCATGGCTTA CAACGTATAC AAGACTGTGA TTGGTAAAAA ATTCATTGAC
GCTGCGATTC CACAAGCGTC TGTAGCTGCT CATTAA
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| Protein sequence | MSLFGHKKGE TMGLTVGSNR DNFNYKVISQ FAIVTVLWGI VGMLVGVILA AQLIWPEITF
NIPWLSYGRL RPLHTNAVIF AFGGSALFAT SYYIVQRTCQ VRLFCDKLAA FTFWGWQAVI
VSAAITLPLG ITTSKEYAEL EWPIDLLITV VWVAYAVVFF GTVIKRKTKH IYVSNWFFGA
YILTIAVLHI VNNVEMPASL LKSYSAYAGA QDAMIQWWYG HNAVGFFLTT SFLGMMYYFI
PRQAERPIYS YRLSIVHFWA LNFTYMWAGP HHLQHTALPD WTQSLGMVFS LILLAPSWGG
MINGIMTLSG AWHKLRRDPI LKFLVVALSF YGMSTFEGSM MSIKTVNSLS HYTDWTIGHV
HSGALGWVAM ITIGSLYYLI PRLVGQRDMY STKLIELHFW IATIGVVIYI AAMWIAGVMQ
GLMWRAFEPD GTLTYSFVES VKATYPSYVI RLLGGLCYLS GMFVMAYNVY KTVIGKKFID
AAIPQASVAA H
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