| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1326 |
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| Symbol | |
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| ID | 6182938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1147903 |
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| End bp | 1148841 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671886 |
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| Product | hypothetical protein |
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| Protein accession | YP_001798059 |
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| Protein GI | 171463946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.12583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 7.14872e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATTA ACCTAAGTTC CCAAGCACAA AGTATGGCTA CCCCTTACCC AGTAAGGCCG
ATCAAATTGA TTGCGCCAGT TGCGGCTGGT GGTGGCCTAG ATAATATTGC CCGTGCTGTT
GCGGAAAAGC TTTCTCGCTC AATTGGCCAA ACAGTGGTTG TGGAAAACAT GGGAGGCGGA
GGTGGATCAA TCGCCTCACA AGCAACCGCC AAAGCTCTAG CAGATGGTTA TACCCTCATG
ATTGCCTATG TAGGCACGCA TGGCACCAAT CCCGCTGTGC GCAAATTACC TTATGACGCC
CTCAAAGATT TCACGCCTAT CGGCATGATT GGTGCGACGC CTAACGTCCT CATCATTAAT
TCTGATTTGC CAATCAAAAA TTTCAAAGAG TTTGTAGATT ACGCAAAAAA GAATCCTGCT
AAGTTAAGCT ACGGTTCTGC AGGTCCAGGT ACATTGACAC ACCTTGGAAT GGAACAATTA
AAGTTAGCGG CCGGCATATT TATGGTGCAT GTACCTTATC GCGGCATAGG CCCCGCTTAT
ACAGACTTAT TGGCTGGCCA AACCGAAGTC ATGTTCCCAA CTTTATTTGC AGCACTCCCT
TACATCACCA CCAATCGCGT TCGTGGTCTA GCGATTACCG GCTCAAAGCG CAGCACCGCC
GCTCCGAATA TCCCCACTTT CAAAGAGCTA GGCTACAACG GCTTTGATGG GCAGCAATGG
TACGGCTTAG TTGGCCCGGC AAATTTACCG CCTACCATCG TAGCGAAGCT AAATACCGAA
CTCAACAAAG TTCTCGCATT GCCAGACTTC TCAGAAAAAA TGACCAATGA AGCAATGACT
TTGATGCCAA TGACACCGCC TCAGTTTGCT AACTACATCA AAGAAGATAT CGCGCGCTGG
GCCAAAGTTG CCAAAGATCG CAATATTGAA ATCGATTAA
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| Protein sequence | MTINLSSQAQ SMATPYPVRP IKLIAPVAAG GGLDNIARAV AEKLSRSIGQ TVVVENMGGG
GGSIASQATA KALADGYTLM IAYVGTHGTN PAVRKLPYDA LKDFTPIGMI GATPNVLIIN
SDLPIKNFKE FVDYAKKNPA KLSYGSAGPG TLTHLGMEQL KLAAGIFMVH VPYRGIGPAY
TDLLAGQTEV MFPTLFAALP YITTNRVRGL AITGSKRSTA APNIPTFKEL GYNGFDGQQW
YGLVGPANLP PTIVAKLNTE LNKVLALPDF SEKMTNEAMT LMPMTPPQFA NYIKEDIARW
AKVAKDRNIE ID
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