| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1291 |
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| Symbol | |
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| ID | 6183216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1118054 |
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| End bp | 1119706 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671857 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001798030 |
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| Protein GI | 171463917 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0896483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.0414381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA TTTATGAACA AGGCTTGGAT CGCAATCCTG CTAACTACAC CCCAATTACT
CCACTCTTAT TCTTAGAGCG TTCAGCGGAA ATTTATCCGA ATAAAACAGC CATTATTCAT
GGCAAGTTAC GCCAGACCTG GAGTCAAACC TATGAGCGTT GCCGCCGCCT AGCGAGCGCT
TTGCAAAAAC ACGGCATTGG CTTGGGTGAT ACGGTAGCTG TGATGCTGCC AAATACCCCT
CCTATGGTAG AGGTGCACTT CGGAATTCCA ATGGCAGGCG CTGTATTAAA TGCTCTTAAT
ACCCGCTTGG ATGCCGAATC TATAGCATTT ATGCTCAACC ATGGTGAGGC AAAAGTGGTT
ATCGTGGATC CTGAGTTTTC GGTTGTTATG AAAAAGGCTC TTGAGATTGC AAAGAAAGAT
TCAGGCCGTG AATTTTTGGT AATCGATGTA GGGGAAAAAG AGTTTGATGT TCCTGGTGAG
AAGTTAGGCA AGTTGACTTA TGAACAGTTT CTTTCTGAGG GTGATCCTAG TTTTGCGTGG
CAAGTTCCTG CAGATGAATG GCAAGCGATT TGCTTGAACT ACACCTCTGG TACAACTGGT
AATCCTAAGG GAGTTGTGTA TCACCATCGT GGTGCCGCTA TTAATGCGGT GTCGAATGTC
TTAGACTGGG ATATCAATAA GCACCCTGTG TACTTATGGA CATTACCGAT GTTCCACTGC
AATGGCTGGT GTTTCCCATG GACGATTGCT GCTCGCGCCG GTGTAAATGT GTGTTTGCGT
CGGGTTGATG CGCAGCATAT TTTTGCAGCT ATTAAAGAGC ATGGCGTAAC CCACTACTGC
GCGGCTCCTA TTGTCCATAA CCTTTTGGTC AATGCGCCTG ATGAGCTAAA GGCTGGTGTT
CCTACAGGCG TCAAAGGCTT GATTGCAGGT GCTGCGCCAC CTGCATCCAT TATTGAGGGT
ATGGAAAAGC TAGGCTTCGA TTTAACTCAT GTTTATGGGT TAACTGAGGT TTATGGTCCT
GCTTCTGTGT GCGTTAAGCA AGACGAGTGG AATGATTTGG ATATTGGCAA GCGCGCTCGT
TTAAATGCTC GTCAAGGTGT ACGCTACCAC ATGCAACAAG CAATCGCAGT TTTGGATCCT
GAGACGATGA AACCAGTTCC AGCTGATGGT GAAACCATGG GCGAAATTAT GTTCAAGGGC
AACATCGCCA TGAAGGGTTA CCTGAAGAAC GAGAAGGCCA CTCAAGAAGC GTTTGAAGGT
GGTTGGTTCC ACTCGGGCGA CTTAGCTGTG ATGAATCCCG ATGGCTATGT CAAGATGAAA
GACCGCAGCA AAGATATCAT CATCTCTGGC GGGGAAAATA TTTCTTCTGT TGAGGTGGAG
GATGTGCTGT ATCGCCATCC CGCAGTGAAC GCCGCTGCGG TTGTTGCCAA GCCTGATCCA
AAGTGGGGTG AAACCCCTTG CGCCTTCCTG GAAATTAAGC CTGGTTCAGA CGTAACCCCA
GAAGAAATCA TTGCCCATTG CAAGCAGCAT TTGGCTGGTT TTAAGGTGCC TAGGGCGATT
GTGTTCTGTG AACTTCCTAA GACCTCAACT GGCAAGATTC AGAAGTTTGA GTTGCGCAAG
CAGGCTGGAT CTGCCACCGC TATTGATGTC TAG
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| Protein sequence | MANIYEQGLD RNPANYTPIT PLLFLERSAE IYPNKTAIIH GKLRQTWSQT YERCRRLASA
LQKHGIGLGD TVAVMLPNTP PMVEVHFGIP MAGAVLNALN TRLDAESIAF MLNHGEAKVV
IVDPEFSVVM KKALEIAKKD SGREFLVIDV GEKEFDVPGE KLGKLTYEQF LSEGDPSFAW
QVPADEWQAI CLNYTSGTTG NPKGVVYHHR GAAINAVSNV LDWDINKHPV YLWTLPMFHC
NGWCFPWTIA ARAGVNVCLR RVDAQHIFAA IKEHGVTHYC AAPIVHNLLV NAPDELKAGV
PTGVKGLIAG AAPPASIIEG MEKLGFDLTH VYGLTEVYGP ASVCVKQDEW NDLDIGKRAR
LNARQGVRYH MQQAIAVLDP ETMKPVPADG ETMGEIMFKG NIAMKGYLKN EKATQEAFEG
GWFHSGDLAV MNPDGYVKMK DRSKDIIISG GENISSVEVE DVLYRHPAVN AAAVVAKPDP
KWGETPCAFL EIKPGSDVTP EEIIAHCKQH LAGFKVPRAI VFCELPKTST GKIQKFELRK
QAGSATAIDV
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