Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1289 |
Symbol | |
ID | 6183870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1116312 |
End bp | 1117247 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641671855 |
Product | Electron transfer flavoprotein alpha subunit |
Protein accession | YP_001798028 |
Protein GI | 171463915 |
COG category | [C] Energy production and conversion |
COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.398679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.0814706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTC TTGTTATTGC TGAACACGAT AATCAATCTT TAAAAGCGGC AACCTTAAAT GCGGTAGCGG CTGCCTTGCA GTGCTCTCCT GAGGTTGATG TGCTGGTTGC TGGTAGCGGT GCTGATGCCG CCGCAGCTGC GGCAGCTCAA ATTGCTGGTG TACGCAAAGT GATTCAAATT GATGCCGCCA ATTTGGCTGA TCAATTGGCT GAACCTTTGG CTGCCCAGAT TATTTCTATT ACTAACAACT ACAGCCATAT CCTCGCTCCT GCAACAGCAA ATGGCAAGAA CATCTTGCCG CGTGTTGCTG CCAAACTCGA TGTTGCTCAG TTATCAGATA TCACTAAAGT GATCTCTGCA GATACTTTTG AGCGCCCAAT CTACGCAGGT AATGCCATTG CCACCGTTCA ATCTGCTGAT CCAATCAAAG TGATTACCGT GCGTACCACC GGCTTTGATC CAGTGGCTGC TACAGGTGGT TCAGCTGCCG TGGAAAAAGC ATCTGCTGCT GATAGCAATG CCCAGTCATC CTTTATGGGG CGTGAGTTGA CTAAATCAGA TCGTCCAGAG TTGACTGCCG CAAAGATCAT CGTGTCCGGT GGTCGTGGTC TGGGTTCTGG TGAGAAGTAT CAAGAGCTCA TTACGCCTTT AGCTGATAAG CTCGGTGCTG CATTAGGGGC TTCACGCGCT GCAGTAGATG CGGGCTACGT TCCAAACGAT TACCAAGTAG GTCAGACCGG CAAGATCGTA GCTCCACAGC TGTATATCGC TGTTGGTATC TCAGGTGCTA TCCAGCATTT GGCTGGCATG AAGGATTCTA AGGTGATTGT TGCCATCAAC AAAGATCCGG AAGCGCCAAT CTTTGGTGTA GCTGACTATG GTTTGGTGGC AGATTTGAAT GCTGCGGTGC CTGAGCTTAC TAAAGCATTG GGCTAA
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Protein sequence | MAALVIAEHD NQSLKAATLN AVAAALQCSP EVDVLVAGSG ADAAAAAAAQ IAGVRKVIQI DAANLADQLA EPLAAQIISI TNNYSHILAP ATANGKNILP RVAAKLDVAQ LSDITKVISA DTFERPIYAG NAIATVQSAD PIKVITVRTT GFDPVAATGG SAAVEKASAA DSNAQSSFMG RELTKSDRPE LTAAKIIVSG GRGLGSGEKY QELITPLADK LGAALGASRA AVDAGYVPND YQVGQTGKIV APQLYIAVGI SGAIQHLAGM KDSKVIVAIN KDPEAPIFGV ADYGLVADLN AAVPELTKAL G
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