| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1248 |
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| Symbol | |
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| ID | 6183402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1080055 |
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| End bp | 1081212 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671822 |
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| Product | glycosyl transferase family 9 |
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| Protein accession | YP_001797996 |
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| Protein GI | 171463883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.9727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT ACTCCACTCT TAAACCAAAA AAGGTGCTAT TTATTGCCAC TCGGCAAATA
GGCGATGTAC TAGTCACAAC ACTCTTAATT AGTAAAGCGA GAGAACTTTG GCCTGAGGCC
GAATTTCATT TTCTAGGCTA TCGCGGCAAG CTTGAGATGT TGCACGGCAA TCCGGATATT
GCTGAAATCA TCGAAACATC TGATCGCCCT GGGTTTGGCG AATACCTCAA CCTATTTAAC
CGTCTATTCC AGCGTTATGA CTTGGCGGTA GTGACCCAGC CCAGTGACCG AGCATATCTT
TATGGATTGG TAGCGGCATT TAGAAGGGTT GGTGTTCTAG GCGGACATCC TCAAGGTAGA
GACGCTAAAG ACCATGGCAT GAACAGTAAG AGTGATAAAC AAAATGCATG GAAGAAGTTC
ATCTGCATGC ACACTGTGGA TGTTGATTAC TTTAATCAAC ACGTCATTAC AGAAAAGCTG
CGCCTTCTAG AAGGCTTCTT TAAAAATCCA GCGGATTTAT TCTCCATGCC GATCTCGGTG
ACACCTCCCG CAGGCGAACC TTTGACGCCT GTCATCGCCA GTGAACTCAT GCAACCCTAT
GTCGTAGTTC ATCCAGGACC TCTGACAGCT TACAAACGTT GGCCACTCGC ATACTGGCAA
GAGCTAGTTA CTTGGTTAGT CAAACACGGC TTTCAGGTAG TATTGAGTGC ATCTCCTGCC
AAACAAGATG TGCAACTCAA CCACGACATC CTATCTTTAT TAACGGAAGA CATTAAGAGC
AAGGTAATTA ATGCTGCTGG CAAGCTATCA ATTCCACAAG CGGGAACGTT AATTCGTAGC
GCTGCTTTGT ATATTGGGGT TGATACTTCG ATTACGCATT TAGCGGCAGC TTGCAACACT
CCAACAATCA CTCTCTTTGG CGCCACCCCA CCAACAAACT TTGGTCCTTG GCCCAATGGC
TTTATTGGCG AACAACCCTA TCAATTACGC GCGCGCACAC AAACCATTGG CAATGTCATC
ATTTTGCAAG GGCCTGGTGA ATGCGTACCA TGTCGTAAAG CAGGATGTCT TGATAAAGCA
GATAGTTATA GCGAGTGTTT GGATCTACTA GAACCCAAGC AAGTGATTGA AGCCATTCAA
AGGGTGCTGC CAAACTAA
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| Protein sequence | MTSYSTLKPK KVLFIATRQI GDVLVTTLLI SKARELWPEA EFHFLGYRGK LEMLHGNPDI
AEIIETSDRP GFGEYLNLFN RLFQRYDLAV VTQPSDRAYL YGLVAAFRRV GVLGGHPQGR
DAKDHGMNSK SDKQNAWKKF ICMHTVDVDY FNQHVITEKL RLLEGFFKNP ADLFSMPISV
TPPAGEPLTP VIASELMQPY VVVHPGPLTA YKRWPLAYWQ ELVTWLVKHG FQVVLSASPA
KQDVQLNHDI LSLLTEDIKS KVINAAGKLS IPQAGTLIRS AALYIGVDTS ITHLAAACNT
PTITLFGATP PTNFGPWPNG FIGEQPYQLR ARTQTIGNVI ILQGPGECVP CRKAGCLDKA
DSYSECLDLL EPKQVIEAIQ RVLPN
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