Gene Pnec_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1214 
Symbol 
ID6183800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1050765 
End bp1051067 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content40% 
IMG OID641671795 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001797971 
Protein GI171463858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0826897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTG TGCTCGGGGG ATTTATTGGT TCATTGTGTA TTGCGATCTG TACTAAGAAA 
TTGAGGATTC ATAGCGTCCC AGCACTTTGG GGAAAATTCA AAGATAAATC CAGCGTTAAA 
AGATTGGCCT ATTCATTTTT AGGCGGATTC ATTTTAATTT TGGGTGCTCG CATCGCCGAT 
GGCTGTGCAA GCGGACTTAT TTTGTCTGGG AACATGGAGA TGGCTGTCAG TAGCTTTGTG 
TTCGCAATTT GTGTGACCCT ATCTTATTTT GTTTTCACAA AATACTTTTA CAAAAAGGGA 
TGA
 
Protein sequence
MWFVLGGFIG SLCIAICTKK LRIHSVPALW GKFKDKSSVK RLAYSFLGGF ILILGARIAD 
GCASGLILSG NMEMAVSSFV FAICVTLSYF VFTKYFYKKG