| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1206 |
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| Symbol | dcd |
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| ID | 6182954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1045185 |
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| End bp | 1045751 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671788 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001797964 |
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| Protein GI | 171463851 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000106779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.445197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTA AATCTGACCA CTGGATCCGC CGCATGGGCG AGCAAGGCAT GATCAGCCCA
TTTGAACCTG GGCAAGTTCG CCAAGACGCA GCAGGTAACA AAATCGTAAG TTATGGCACA
TCAAGCTATG GCTATGATAT TCGTTGCGCT GATGAATTTA AGATCTTTAC CAACATCAAT
AGCACCATCG TTGACCCGAA GAATTTTGAT GAACAATCCT TTGTTAATTT CAAGGGCGAT
GTTTGCATCA TTCCGCCAAA CTCTTTTGCT TTGGCAAGAA CGGTGGAGTA TTTCAAGATT
CCACGTAGCG TTCTCACCGT TTGTGTTGGT AAAAGCACCT ATGCGCGTTG CGGCATTATT
GTGAACGTCA CACCATTCGA GCCTGAGTGG GAGGGGTATG TCACTTTAGA ATTTTCAAAT
ACTACACCAT TGCCAGCGAA AATTTACGCA GGTGAAGGCT GTGCGCAAGT ACTCTTTTTT
GAGGGTGATG AAGTTTGTGG CACATCGTAT AAAGATCGCG GTGGCAAGTA TCAAGGTCAG
CGGGGCGTTA CCCTGCCCAA GACCTAA
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| Protein sequence | MTIKSDHWIR RMGEQGMISP FEPGQVRQDA AGNKIVSYGT SSYGYDIRCA DEFKIFTNIN
STIVDPKNFD EQSFVNFKGD VCIIPPNSFA LARTVEYFKI PRSVLTVCVG KSTYARCGII
VNVTPFEPEW EGYVTLEFSN TTPLPAKIYA GEGCAQVLFF EGDEVCGTSY KDRGGKYQGQ
RGVTLPKT
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