| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1202 |
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| Symbol | |
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| ID | 6183168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1039884 |
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| End bp | 1040435 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671785 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001797961 |
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| Protein GI | 171463848 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00964001 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.857795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGTTTT GGGCCAAACT CTCTGCAGGC ATTGATCGGG TAAACCAGTT TCTGGGCAAG
GTAGCCAGCA TCATGATTTT GCTGTCTTGC GTCGTATCTG CGACAAATGC ACTTCTGCGC
TACGGCTTTG ATCTCAGCAA TAATTGGCCA CTAGAACTCC AGTGGTACCT ATTTGCGGCG
ACTGTCATGC TTGGTGCCTC TTACACCCTC AAGCGTAATG AGCATGTGCG TGTCGATTTA
ATTTACTCCC AACTCTCGGA TCGTGGACGC TTGTGGGTTG ATCTATTTGG CTTGATTTTC
TTTTTAATGC CCGCCTGCAT TCTATTTACA TGGCTCTCAT GGACTACTCT TTTTTATCCC
TCTTGGCTAG TCATGGAGCA TTCACTAAAC TCCGGTGGCT TAGCGCGCTA TCCAATTAAG
TTTGTAGTCC CCTTTGGATT TTTCATGCTG AGCCTGCAAG GCTTATCTGA AATCATTAAG
CGTATCGGCG CACTCAAAGG TGAAATCACC CTACCGGCCG AAGACCTACA TTACGAAAAG
CCCATGCAAT GA
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| Protein sequence | MGFWAKLSAG IDRVNQFLGK VASIMILLSC VVSATNALLR YGFDLSNNWP LELQWYLFAA
TVMLGASYTL KRNEHVRVDL IYSQLSDRGR LWVDLFGLIF FLMPACILFT WLSWTTLFYP
SWLVMEHSLN SGGLARYPIK FVVPFGFFML SLQGLSEIIK RIGALKGEIT LPAEDLHYEK
PMQ
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