| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1187 |
|---|
| Symbol | |
|---|
| ID | 6184204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1026625 |
|---|
| End bp | 1027644 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641671772 |
|---|
| Product | Inositol phosphatase/fructose-16-bisphosphatase |
|---|
| Protein accession | YP_001797948 |
|---|
| Protein GI | 171463835 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0158] Fructose-1,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.146962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG GAGAAATACC TTTGTCCTCA AGTACCTATA TTAATTTCAA GCAGTATTTA
GCATCTGTAA AACCTGCGGG CGCTGCCTTA CCAACCGGCC TGCAAGATTT GCTGATTGCA
GTAGTCAATA CCTGCTCAAA GCTGAGTCAT GAAGTCGCAC AGGGTGCACT TATTGGATTG
CTAGGACCTG CAGGTACCGG CAATGTACAG GGGGAAGTCC AGCAAAAGCT CGACATCATT
GCAAATGATT TGTTGATCGA TGGTGTTCAA GGTTGCAAGT CTCTGGCTGG TTTGGCTTCG
GAAGAGATGG AGCTTCCGGT GCCAGTGCAG GGAACAGGCG ATTACCTACT CTTATTTGAT
CCGCTTGATG GCTCATCCAA TATTGATGTG AACGTTTCGA TTGGAACGAT CTTTTCGGTT
TTGAAGAAAC AGGATCCCGC AGCGCCTTTG CAAACTTCAG ACTTCTTGTT ATCAGGTCGT
CATCAAGTTG CCGCTGGTTA TGTGGTGTAT GGCCCGCAAA CCACCATGGC GTTGACCTTG
GGTGATGGTG TGGTGATGTT TACGCTCAAT AAAGTGACTG GCGAGTTTTT GCTGATCAAG
GATTCCGTAA CAATTTCTCA TTCCACAAAA GAGTTTGCAA TAAATATGTC CAATATGCGC
CACTGGGCCG ACCCAGTGCG TCGCTATGTT GAAGAGTGTC TCGCTGGTGT GAGTGGTGCG
CGCGATAAGG ATTTCAATAT GCGTTGGATT GCTTCTATGG TGGCTGATGT GCATCGTGTT
TTATCTCGAG GCGGTGTATT TATGTACCCA TGGGATCAAC GTGAGCCTCA TAAACCTGGC
AAGTTGCGTT TGATGTACGA AGTCAATCCA ATGAGCTTCT TGGTTGAGCA GGCGGGTGGC
GTCTCTACTA ATGGCACAGA TCTCATTATG GATTTGCAGC CTACTGATTT GCACGAGCGT
GTTTCAGTAA TGCTTGGATC TAAAGAAGAG ATTGATCGCA TTCAGCACTA TCACTCATAA
|
|---|
| Protein sequence | MKTGEIPLSS STYINFKQYL ASVKPAGAAL PTGLQDLLIA VVNTCSKLSH EVAQGALIGL
LGPAGTGNVQ GEVQQKLDII ANDLLIDGVQ GCKSLAGLAS EEMELPVPVQ GTGDYLLLFD
PLDGSSNIDV NVSIGTIFSV LKKQDPAAPL QTSDFLLSGR HQVAAGYVVY GPQTTMALTL
GDGVVMFTLN KVTGEFLLIK DSVTISHSTK EFAINMSNMR HWADPVRRYV EECLAGVSGA
RDKDFNMRWI ASMVADVHRV LSRGGVFMYP WDQREPHKPG KLRLMYEVNP MSFLVEQAGG
VSTNGTDLIM DLQPTDLHER VSVMLGSKEE IDRIQHYHS
|
|---|
| |