| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1162 |
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| Symbol | |
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| ID | 6183245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1007993 |
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| End bp | 1008949 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671759 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_001797935 |
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| Protein GI | 171463822 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.238547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAA ATACCCCAAA ACACTCCAAA GTTCTGATCC TCGGATCTGG CCCTGCTGGC
TATACAGCAG TTGTCTATGC TGCCCGAGCC AATTTAAACC CGACCCTCAT CACTGGTCTG
GCTCAAGGTG GTCAATTAAT GACTACGACC GACGTTGAAA ACTGGCCGGC GGATGCCGAT
GGTGTTCAAG GTCCAGAGCT CATGGACCGC TTTTTGAAGC ATGCCGAACG TTTCAATACT
GAAATCATTT TTGACCATAT TCATACCGCC GCCCTCAAAG AGAAGCCAAT TCGTTTGGTT
GGTGATTCTG GAACGTATAC CTGTGATGCC TTAATTATTT GTACTGGAGC CTCAGCTCAA
TACATCGGCC TACCAAGTGA GGAAGCATTC ATGGGTCACG GCGTTTCTGG TTGCGCAACT
TGTGATGGTT TCTTCTACCG CAATCAAGAT GTTTGCGTAG TGGGTGGTGG TAACACCGCA
GTTGAAGAAG CGCTCTACCT AACGGGCATT GCTAAAAAAG TAACCGTGAT TCATCGTCGC
GATAAATTCC GTGCTGAGCC AATCTTGAAC GATCGCTTAA TGGCGAAAGT TGCCGAAGGC
AAAGTAGAAC TCAAATTGAA CGCCACTCTT GATGAAGTGC TTGGCGATGA AAAAGGTGTT
ACTGGCGTAC GCATTAAGAA ACAAGATGGC AGCACTGAAG ACATCGTCGT AACTGGCGCC
TTTATTGCCA TTGGCCACAA ACCAAACACT GAACTCTTTG TTGGTCAGCT CGACATGAAC
AATGGCTACC TCAAGACCCA CTCAGGACTT GAAGGTAATG CCACAGCAAC AAACATCCCC
GGTGTGTTTG CAGCAGGCGA CGTACAAGAC CACATCTACC GTCAAGCAAT TACCAGTGCT
GGCACAGGCT GTATGGCTGC ATTAGATGCG CAGCGTTACT TAGAAACATT AGAATAA
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| Protein sequence | MTTNTPKHSK VLILGSGPAG YTAVVYAARA NLNPTLITGL AQGGQLMTTT DVENWPADAD
GVQGPELMDR FLKHAERFNT EIIFDHIHTA ALKEKPIRLV GDSGTYTCDA LIICTGASAQ
YIGLPSEEAF MGHGVSGCAT CDGFFYRNQD VCVVGGGNTA VEEALYLTGI AKKVTVIHRR
DKFRAEPILN DRLMAKVAEG KVELKLNATL DEVLGDEKGV TGVRIKKQDG STEDIVVTGA
FIAIGHKPNT ELFVGQLDMN NGYLKTHSGL EGNATATNIP GVFAAGDVQD HIYRQAITSA
GTGCMAALDA QRYLETLE
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