| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1126 |
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| Symbol | |
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| ID | 6183358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 981027 |
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| End bp | 982931 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671730 |
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| Product | ABC transporter related |
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| Protein accession | YP_001797907 |
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| Protein GI | 171463794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.239651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAA TCGTACTTAC TGATGCAAAA CTGGCTTTTG GCCACGTTGA TCTCCTCGCA
AACACTGCTT TTTCTCTGGA ATCTGGTGAG CGTGTTGGCT TAATTGGCCG GAATGGCGCT
GGCAAATCTT CCTTGCTAAA GATACTAGTT GGTATCGAAA AAATGGATGA CGGCCTTTTG
CAATACCAAC AGGGCTTGCG TATTGCTTAT GTTCCCCAAG AGCCTATCTT TGAGGCCGAA
GAAACTATTT TTGACGCAGT CTCAAAAGGT GTGGCGCAAG CAAAAGCCTT GCGTGAGGAG
TATGAGGCGC TGAGTGTTGG AGAGTGGGAT GGTGCCTCCC ATCATCGCTT GGACGAAGTG
CAATCTCAAT TAGAGGCTCT TAGCGGTTGG AATTGGGAGC AACGGGTTCA TGAAACTTTA
GATCGCTTAC ATCTCGATGC TGATCTGAAG ATCAATACCC TATCTGGTGG AACAAAAAAA
CGCGTTGCTC TAGCGCGTGC TTTAGTCGAA ATGCCGGACG TGCTATTGCT AGATGAGCCA
ACCAACCATT TGGATTTAGA TTCGATTGCA TGGCTAGAAG ACCTGCTGAA AGAATATCAA
GGCTCTGTGA TATTAATTAC CCATGATCGT GCCTTCTTGG ATAACGTCTG TACACAAATT
GTTGAGCTTG ATCGCGGTAT TCTGCGCAGC TACCCCGGCA ACTTCACGCA ATATGAGGTA
TTAAAAGAGC AGGAGCTCAA TGCGGAGTCT TTGGCTAATG CTCGGGCAGA TAAATTATTG
GCCCAGGAGG AGGTTTGGGT TCGTAAAGGG GTTGAGGCGC GGCGCACCAG AAGCGTTGCC
AGAATAGCGC GCTTGGGAAA GTTACGCAGT AGCCGTGCCG AGCGCAGAGA CACTATGGGG
CAGGTGAAAC TGGCTGTTTC TGCAGGTGAT CGTAGCGGTA AGATCGTGGC TGATTTACAG
AATGTCAGCA AAACTTATGA TCGTCCGATT GTGAAGGATT TCACGGCAAT AATTTTACGT
GGCGATAAGG TTGGCCTATT AGGACCTAAT GGCGCAGGCA AGACAACCTT GCTCAAGCTC
ATTTTAGGAA CGATTGCACC TGACTCAGGT ACTGTAACGA TGGGTACTCG AATTGAGGTT
GCCTATTTTG ACCAAATGCG TGAGGGCCTG GATCTTAATG CTTCGCTAGA AGATTACATT
AGCCCAGGCA GTGAGTGGAT CGAAATCAAT GGTAATAAAA AGCACGTCAA GAGTTACTTG
AGTGATTTTT TGTTTGTGCC AGAGAGAACC AATTCACCTG TGAGCACCTT ATCTGGTGGC
GAACGTAACC GTTTATTGCT GGCGCGTTTG TTCGCAAGAC CGGCCAATGT ATTGGTTTTG
GATGAGCCAA CCAACGATTT AGATATTGAT ACGCTGGATT TACTTGAGCA ACTTTTGCAA
GATTACAAAG GTACCGTCTT TTTGGTAAGT CATGACCGTT ACTTCTTAGA TAACGTAGTT
ACTAGCATTA TTGCGAATGA AGGCGACGGA TTTTGGCGAG AGTATGAGGG CGGTTACGAG
GATTGGAAGA TTCAAAAAGC GCGTTCAGAA AAAATCTGCG CATCTAATGT CAATTCGAAA
TCAACTGAGA AGGCGGAAGC CAAAGTTGAG GCAAAGCCAG CCACTAAAAG CGGCGTTCAG
AAGCTCAATG GCAAAGAGCG CCAAGAGTTA GAGGCATTGC CTATGCAGAT CGAAGTGTTG
GAAACAGAGC AGGCTGATAT CGGCATAGCC ATGAGTAATC CAGACTTGTA TAAAAATGAG
CCGGAATTAG CGGCGAGTAT GCAGGCGCGT CTGAGCAAAA TCACTGCCGA CTTAGATCAA
AAACTGCAAC GCTGGGAACA ACTCTTAAGC CGTTCTGAAT CTTAA
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| Protein sequence | MALIVLTDAK LAFGHVDLLA NTAFSLESGE RVGLIGRNGA GKSSLLKILV GIEKMDDGLL
QYQQGLRIAY VPQEPIFEAE ETIFDAVSKG VAQAKALREE YEALSVGEWD GASHHRLDEV
QSQLEALSGW NWEQRVHETL DRLHLDADLK INTLSGGTKK RVALARALVE MPDVLLLDEP
TNHLDLDSIA WLEDLLKEYQ GSVILITHDR AFLDNVCTQI VELDRGILRS YPGNFTQYEV
LKEQELNAES LANARADKLL AQEEVWVRKG VEARRTRSVA RIARLGKLRS SRAERRDTMG
QVKLAVSAGD RSGKIVADLQ NVSKTYDRPI VKDFTAIILR GDKVGLLGPN GAGKTTLLKL
ILGTIAPDSG TVTMGTRIEV AYFDQMREGL DLNASLEDYI SPGSEWIEIN GNKKHVKSYL
SDFLFVPERT NSPVSTLSGG ERNRLLLARL FARPANVLVL DEPTNDLDID TLDLLEQLLQ
DYKGTVFLVS HDRYFLDNVV TSIIANEGDG FWREYEGGYE DWKIQKARSE KICASNVNSK
STEKAEAKVE AKPATKSGVQ KLNGKERQEL EALPMQIEVL ETEQADIGIA MSNPDLYKNE
PELAASMQAR LSKITADLDQ KLQRWEQLLS RSES
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