| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1124 |
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| Symbol | |
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| ID | 6183316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 979717 |
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| End bp | 980697 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671728 |
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| Product | heat shock protein DnaJ domain protein |
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| Protein accession | YP_001797905 |
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| Protein GI | 171463792 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.405615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA GGGATTACTA CGAAACACTT GGCGTTGCTC GAGGCGCTAC TGAAGCTGAA
ATCAAAACAG CCTATCGCAA ACTAGCGCGT AAATATCATC CAGATGTTAA TAAAGAAGTT
GGCGCCGAAG AACAATTTAA GCAAATTGGC GAGGCTTATG CTGTTTTAAA AGATACTGAA
AAACGCGCTG CCTATGATCG CTTTGGTGAG CACTGGAAAA ACGGCCAAGA CTTTACGCCT
CCTCCGAATT GGAATGAAGG CTTTGAATAT TCTGATGCTG GATTTGGTGG TGGCCACCCT
GGATATGGCG GTGGCTTTGA GGGTGATCAA AGCGAATTCT TTGAGTCACT CTTTGGCAGA
GGCAAACATC GTCAAGGTGG ACGTGGCGGC CATAGCCGTC AGGGTAAGAA TTTCAAAGGT
CAAGATCATC ACGCAAAGAT TTTGATCGAT CTGGCAGATG CCTATAACGG CGCCAAACGC
ACTATCTCCC TACACATGCC TACACAAGAT GCGAGCGGTC ATGTCAGCAC ACAAGAGCGC
AAGTTAGACG TCAGCATTCC GAAAGGTATC AAGGCCGGAC AAAACCTCCG CCTCGCTGGT
CAAGGCGGTC CCGGAGTTGG AGAAGGCCCT GCCGGTGATT TATATTTAGA AATCGATTTT
CATCCAACCC CCATCTATCG CGTAGAAGGT AAGGATGTCT TCATCGATAT TCCTTTGGCG
CCTTGGGAAG CAGCTTTGGG CACTTCAATC AATATACCCA CCCCAGCAGG CAGCACACTA
GAACTAAAAA TCCCAGCAGG AACTCTTGCC GGTCGCAAGA TGCGTCTCAA AGGGAAGGGG
ATTCCTAGCT CAGAGCTTGG TGATTTATAT GTAGTGCCTA CTATTACCCT ACCACCAGCA
GAAACGGATG CTCAAAAAGA AGCCTATCAA AATTTTGAAA AAGCTTTTGA TTTCAACCCT
AGATCTCACC TGAAGGGATG A
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| Protein sequence | MKFRDYYETL GVARGATEAE IKTAYRKLAR KYHPDVNKEV GAEEQFKQIG EAYAVLKDTE
KRAAYDRFGE HWKNGQDFTP PPNWNEGFEY SDAGFGGGHP GYGGGFEGDQ SEFFESLFGR
GKHRQGGRGG HSRQGKNFKG QDHHAKILID LADAYNGAKR TISLHMPTQD ASGHVSTQER
KLDVSIPKGI KAGQNLRLAG QGGPGVGEGP AGDLYLEIDF HPTPIYRVEG KDVFIDIPLA
PWEAALGTSI NIPTPAGSTL ELKIPAGTLA GRKMRLKGKG IPSSELGDLY VVPTITLPPA
ETDAQKEAYQ NFEKAFDFNP RSHLKG
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