| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1082 |
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| Symbol | |
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| ID | 6183642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 938946 |
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| End bp | 939962 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671693 |
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| Product | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 |
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| Protein accession | YP_001797870 |
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| Protein GI | 171463757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.209061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.323872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTGA ATCGATTTTG GCTCTTTGCC TTGGCAGTAT TACTTGCGGT TTGCACTTCG
GTGAATGCAC CCGCAATTGC TGCAAATAAA GATAAACAGC AAGCCAAAAC CAGTGCTAAG
GCAACAACTA AGACCAGTAC TAAAGCCAGC AAGAAGCCCA AAACAGTTCG CGTAACTGTA
ACGCGCTCGA CAGAGCCCGT TGTTCCTGCC AGACCATCTC TTGCTACCGC ATTAGGATTG
CGCGAACAGC ATGATAAACT CAATCTGAAA TCTAGCGTAG CAATGGTTGT CAATCAAGAT
ACTAAAGAGG TGTATTTTGA AAAAAATCCT TCAGTCAGTC TGCCCATTGC TTCCATTACG
AAGTTAATGA CAGCAATGGT GGTTTTAGAT TCAAAACTGC CTTTAGATGA AGCTATTGTG
ATTAACGCTG ATGATATACA TATTTATCGT ACTTCCCGTT TGGCTGGCGG CACTGTTTTA
ACGCGCGAAG AGGCTTTATT GCTAGCGTTA ATGTCCTCTG AGAATCGCGC TGCATATACC
TTGGGAAGAA ATTACCCGGG CGGCATTCCT GCATTTGTGG ATGCTATGAA CCGTAAGGCA
AAAGAGTTGG GTATGAATCA TTCTCACTTT GCGGATCCCA CTGGCCTCAT GAGTGAAAAC
GTTGCTACTG CAGAAGATCT TACGCGCATG CTCAACGCCG CCTATCAATA CAAAATGATC
CGTGAGTTTT CAACATGGCC AGATTTAACA ATGGTTATTG CAAAACGCCC ACAGAAGTTT
TTGAATACTA ATCGCTTAGT GCGTTCTGGC GATATGAATA TTGGACTGCA GAAAACAGGC
TTTATTAACG CCGCTGGTAA ATGTTTGGTA ATGCAAGCGA GAGTTAACAA CACCCCATTG
TTATTGGTCT TCTTAGATTC TGTTGGCACG CAGTCCCGAT TTGCTGATGC TGTGCGTGTG
CGTGATTGGT ATGAGCGTAT GCCTCCTGGA GCACAGCCAA TTCGCCGCTT AATGTAA
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| Protein sequence | MRLNRFWLFA LAVLLAVCTS VNAPAIAANK DKQQAKTSAK ATTKTSTKAS KKPKTVRVTV
TRSTEPVVPA RPSLATALGL REQHDKLNLK SSVAMVVNQD TKEVYFEKNP SVSLPIASIT
KLMTAMVVLD SKLPLDEAIV INADDIHIYR TSRLAGGTVL TREEALLLAL MSSENRAAYT
LGRNYPGGIP AFVDAMNRKA KELGMNHSHF ADPTGLMSEN VATAEDLTRM LNAAYQYKMI
REFSTWPDLT MVIAKRPQKF LNTNRLVRSG DMNIGLQKTG FINAAGKCLV MQARVNNTPL
LLVFLDSVGT QSRFADAVRV RDWYERMPPG AQPIRRLM
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