| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1080 |
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| Symbol | |
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| ID | 6183263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 937003 |
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| End bp | 938037 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671691 |
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| Product | Dihydroorotate oxidase |
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| Protein accession | YP_001797868 |
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| Protein GI | 171463755 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.106041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.333003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC GTTACTCCCT CCTGCGCCCT TGGCTTTTTT GCATAGACCC TGAAAAAGCC
CACAACCTTA CCCTAAGTAA TTTAGATCGC GCACAGCGTT GGGGATTTTT GGAACGCTTG
ATTACCAAAC CGATTAACGA TCCTCAAGTA TTGTGTGGGA TTGAGTTTTC CAACCCTGTT
GGTCTAGCCG CTGGATTAGA CAAAGATGGC AAGTATATCG ATGCACTGGC TGCATTAGGA
TTTGGATTTT TAGAAATCGG CACCGTTACA CCCCGACCAC AACCTGGCAA TCCCAAGCCA
CGAATGTTTC GACTCCCGGA AGCACAAGCC ATCATTAATC GTATGGGCTT CAATAACGAT
GGTGTTGAGG CCTGCGTAGC AAGAGTACGC TGTTCAAAAT TTTGGCAAAA CGGCGGCGTT
CTTGGGATGA ATATTGGCAA AAATGCCAGC ACACCAATTG AAGAGGCGTC GCGCGATTAC
ATCTTGGCTA TGGAAGCTGT TTACGAAATT GCTACTTACA TTACCATCAA TATCTCTTCC
CCTAATACTC AAAATCTACG CGCACTCCAG GGCGAAGAAA TGCTCCGCGA ATTACTCGGC
AGCTTAGGTG AAGCCAGAAA ACATTTATGC GATCGTCATG GCGTACGAAA ACCACTATTC
CTGAAAATTG CACCAAACTT AGATCAGGGC GATATCAATC TCATTGCCGA CCTCCTACTT
GAGTTTGGCA TCGATGCAGT TATTGCCACC AACACAACTA TCTCCCGCGA TGCAGTCAAG
GGAATGGAAT TTGGCGAAGA AGCTGGCGGC CTATCTGGCG CACCTGTTCG CAATGCCTCG
AATATCGTCA TCAAAGCTTT GAAAGCAAGG CTTGGCAATC AACTACCGAT CATCGGCGTT
GGCGGCATCA TGTCTGGAGT TGATGCACGA GAAAAGATCA TGGCTGGTGC TAGCCTGGTC
CAACTCTATA GCGGCCTGAT CTATCGCGGC CCAGACTTGG TCTACAAGTG CGCTACCGTC
CTAAGGCAAC CCTAA
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| Protein sequence | MIDRYSLLRP WLFCIDPEKA HNLTLSNLDR AQRWGFLERL ITKPINDPQV LCGIEFSNPV
GLAAGLDKDG KYIDALAALG FGFLEIGTVT PRPQPGNPKP RMFRLPEAQA IINRMGFNND
GVEACVARVR CSKFWQNGGV LGMNIGKNAS TPIEEASRDY ILAMEAVYEI ATYITINISS
PNTQNLRALQ GEEMLRELLG SLGEARKHLC DRHGVRKPLF LKIAPNLDQG DINLIADLLL
EFGIDAVIAT NTTISRDAVK GMEFGEEAGG LSGAPVRNAS NIVIKALKAR LGNQLPIIGV
GGIMSGVDAR EKIMAGASLV QLYSGLIYRG PDLVYKCATV LRQP
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