| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1051 |
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| Symbol | truA |
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| ID | 6183614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 913883 |
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| End bp | 914713 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671663 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001797840 |
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| Protein GI | 171463727 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.238902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAG CCCTTGGACT TCAGTACGAC GGCAGCCCAT ATTCCGGTTG GCAAACCCAG
GTTAATCACA ATACAGTGCA GAATGAATTA GAAAAAGCCA TTTCTGCTTT TGTTGGTGAG
CAGGCCTGTG TAGTGAAACC TATTAATACA ATCACTGCTG GAAGAACCGA TACTGGTGTT
CACGCCTTAG GGCAGGTGGT TCACTTTGAT ACCAATGTTG AGCGCGAAGA CTTCTCATGG
GTGAGGGGGG TGAACTCATT CCTGTCATCA TCTATTGTCA TTAACTGGGC GAAGCCTGTC
TCGGAAGAAT TCTGTGCACG TTTTTCAGCT TATGAGCGTG AATATATTTA TGCATTGCAT
GCTGGACCGT GTCGCTCACC AATGGCTCAT TCGCGTGCTG GTTATTTAAT GCTTCCACCA
AGTCAATGGT TCGACATTGA GGCGATGCAA AAATCTGCTG AGTGTTTAAT TGGTGAGCAT
GATTTCAGTT CGTTTCGATC ATCTGAGTGT CAGAGCAAAA CGCCAATCAA AACGATCTAT
TTGATTGAGA TTATTTCTAA GCAACCTTGG CTGTATTTCC GTATCCGAGG AAATGCCTTT
TTGCATCATA TGATCCGCAA TCTTGTTGGA TGCTTTTTGC AAATTGGTCA AGGCAAGCAA
ACATCGCAAT GGATGGCAGA GGTTTTGGCT GCCAAAAATA GGCAAATTGC AGCCCCGACT
TTTATGGCTG ATGGCTTGTA TTTGGCAAAA ATTACCTATC CACAGGAATT TGCGATCCCG
CAGCCTTGGC TGAAAAGCTC CTGGCTACCC GCTCAGGTTA TCGGGAAATA A
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| Protein sequence | MRIALGLQYD GSPYSGWQTQ VNHNTVQNEL EKAISAFVGE QACVVKPINT ITAGRTDTGV
HALGQVVHFD TNVEREDFSW VRGVNSFLSS SIVINWAKPV SEEFCARFSA YEREYIYALH
AGPCRSPMAH SRAGYLMLPP SQWFDIEAMQ KSAECLIGEH DFSSFRSSEC QSKTPIKTIY
LIEIISKQPW LYFRIRGNAF LHHMIRNLVG CFLQIGQGKQ TSQWMAEVLA AKNRQIAAPT
FMADGLYLAK ITYPQEFAIP QPWLKSSWLP AQVIGK
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