| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1043 |
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| Symbol | |
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| ID | 6183383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 905985 |
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| End bp | 907523 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671655 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001797832 |
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| Protein GI | 171463719 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.603388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCG TCGTCGGAAC TATTTCCCAC TCACCAGTAA ATCAACTTCT CTATGATGCC
TTGTTGCTTT TGCAACATCG CGGTCAAGAC GCTGCCGGTA TTGCTACGAT GAACGGTAAT
TCGTTCACGA TGCATAAAGC CAATGGCTTA GTGCGAGATG TTTTCAGAAC ACGCAATATG
CGCAGCTTAG TAGGAAACGC GGGTATTGGT CAGGTGCGTT ACCCAACCGC TGGATCAGCA
AGTAGTGAAG AGGAGGCTCA ACCTTTTTAT GTGAGCGCTC CTTATGGGAT TATCTTGGCT
CATAACGGCA ATCTAACCAA TGCACCAAGC TTGCGGGTTG AGATGGCATA TCGGGATCGT
CGTCACATCA ATACGAGCTC TGACACTGAG GTGCTACTCA ACGTCTTAGC TGATGAGCTT
CAAAAAGAAA CTAATAGTGC AGCGCTTGAT GAGGGCGCGA TGTTTAATGC CGTCACCGGA
GTAACAAATC GCGTTAAAGG TTCTTATGCT GTAGTTTCTT TAATTGCAGG TTATGGCTTG
TTAGCCTTCC GTGATCAGTA CGGTATTCGT CCTCTATGTA TTGGTCGTAT CGATACTCCA
CAGGGTCCTG AGTGGATGAT TGCATCTGAG TCAGTTGCTC TTGAAGGCTT GGGCTTTACG
TTTGTACGTG ATGTCAATCC AGGTGAAGCA ATCTATATTG ATTTGGATGG CAATTTTTAT
TCACGTCAGT GCGTACCGAA TGCAGTGCTG ACTCCCTGCA TTTTTGAATA CGTCTACATG
GCTCGTCCCG ACTCTACTAT TGATGGCGTT ACTGTCTATA ACGTGCGTAT GCGCATGGGC
GATTACTTGG CTGAGAAGAT TCGCAAAGAG ACTAATGTTA ATGAGATCGA CGTAGTGATG
CCAATTCCAG ACTCGAGTCG CCCAGCAGCA ATGCAGGTTG CCAAGAATTT AGGCGTTGAT
TACCGCGAAG GTTTCTTTAA AAACCGTTAT ATCGGTCGTA CTTTCATCAT GCCAGGGCAG
GCTGTTCGCA AGAAGTCTGT ACGTCAAAAA CTCAATGCAA TGCGTATCGA ATTTAAAGAT
AAGACGGTGT TAATTGTGGA TGACTCCATC GTACGCGGAA CCATCTCCTT TGAGATTGTG
CAGATGGCTC GCGAATCCGG TGCTAAGAAA GTGATCTTTG CTTCTGCTGC GCCACCGGTG
CGCTTCCCGA ATGTATATGG CATTGATATG CCTACTCGTA GTGAGTTGGT AGCCTATGGC
CGTACCGATG AAGAAATCAA CAAGATGATT GGTGCTGATC AGTTGATTTA TCAGAGCGTA
GAGGATATGA AGCAGGCTGT TAGGGACATT AACCCGAATA TTCAAAACTT TGAAGCTTCT
TGCTTCGATG GTTTTTATAT CACAGGCGAT ATTACCGAGT CCTACCTTGA TGCTCTAGAA
GCAGCTAGGA ATACCTCAGC TGCTAAAGCT GACCGTCAGA AGGATTCGAG TGACTTTGCT
CGCTCCCAAC TCCATCTGCA TTTAGCTACC GAAGACTAA
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| Protein sequence | MCGVVGTISH SPVNQLLYDA LLLLQHRGQD AAGIATMNGN SFTMHKANGL VRDVFRTRNM
RSLVGNAGIG QVRYPTAGSA SSEEEAQPFY VSAPYGIILA HNGNLTNAPS LRVEMAYRDR
RHINTSSDTE VLLNVLADEL QKETNSAALD EGAMFNAVTG VTNRVKGSYA VVSLIAGYGL
LAFRDQYGIR PLCIGRIDTP QGPEWMIASE SVALEGLGFT FVRDVNPGEA IYIDLDGNFY
SRQCVPNAVL TPCIFEYVYM ARPDSTIDGV TVYNVRMRMG DYLAEKIRKE TNVNEIDVVM
PIPDSSRPAA MQVAKNLGVD YREGFFKNRY IGRTFIMPGQ AVRKKSVRQK LNAMRIEFKD
KTVLIVDDSI VRGTISFEIV QMARESGAKK VIFASAAPPV RFPNVYGIDM PTRSELVAYG
RTDEEINKMI GADQLIYQSV EDMKQAVRDI NPNIQNFEAS CFDGFYITGD ITESYLDALE
AARNTSAAKA DRQKDSSDFA RSQLHLHLAT ED
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