Gene Pnec_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1031 
Symbol 
ID6184031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp897790 
End bp898227 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID641671643 
Producthypothetical protein 
Protein accessionYP_001797820 
Protein GI171463707 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.454179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TACTTTCCAT CATTGCCTTG TTGACCATAG TTTTTGGTTT TGCTTTGCAT 
GCCTCGGCGC AATCTGCTGG CAATACCAAA GTGGTTTATC ACATCGATGA TGCTGAAACA
CAGGGTTTAA AAGGCTTGCG TAATATTCGC AATCACTTGG ATGTCTCGCC GCAGACCACC
ATCATTGTTG TGACGCATGC CAATGGCGTG GACCTATTGA TGGAGGGTGC TAAGGACAAG
AAAAGTGGCG CTGATTATGC GTCTTTGGTT GGCGCATTAA AGTCCCGTGG CGTGAAGTTT
GAGGTTTGTG AGATCACCCT CAAAAATCGT AACTTGAAAA AAGATCAGTT CACTTTAGAT
GCGGATTTCA CACCATCCGG AGTGGTGCGC GTGGCCGATT TGCAATATAA AGATGGATTT
TCTTACATCA AGCCTTAA
 
Protein sequence
MKKILSIIAL LTIVFGFALH ASAQSAGNTK VVYHIDDAET QGLKGLRNIR NHLDVSPQTT 
IIVVTHANGV DLLMEGAKDK KSGADYASLV GALKSRGVKF EVCEITLKNR NLKKDQFTLD
ADFTPSGVVR VADLQYKDGF SYIKP