| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1022 |
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| Symbol | |
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| ID | 6184162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 892449 |
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| End bp | 893525 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671637 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001797814 |
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| Protein GI | 171463701 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.239082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACCCA GTAACCCGCA CGTCTTAAGA GCTGATCAAT TTTTATCTGA GTTAGGTCAG
TTTGACTTGG TCATTGACGT CAGATCGCCA GCAGAATTTA CCTTAGATCA CATCCCAGGT
GCAGTCAATT ACCCTGTTCT TGGTAATGAG GAGCGCGCTA AAATTGGCAC GCTTTACAAA
CAGGTTTCTC CATTTGCCGC AAAAAAACTC GGCGCCGCGT TGGTTTTTAA AAATATTACC
GCACATCTTG AAAACCACTT CTTAGAATTG CCTCGTGAAT GGCGTCCATT AATTTATTGT
TGGCGTGGTG GTGAGCGCAG TGGCGCATTT ACCCATATTC TGAATCGAAT TGGTTGGAAA
GCGAAACAGT TGGAGGGTGG GTATCAAGGT TTTCGTCGTA CTGTGATTGA TGGCCTAGAT
CAGGCGGCGA GTCAATTTTC TTTTCAGGTC ATCTGCGGCA TGACCGGTAG CGGTAAGACG
AGGGTGCTTC ACGAGATTGG TGCCTTGGGG GCTCAAATTC TCGATCTAGA GGGTTTAGCT
GTGCATCGAG GCTCGGTGCT GGGTAATGAG CCCAATGAGG ATCAGCCTAC GCAAAAGGGG
TTTGAGACTG TATTGTGGAA TGCATTGCGT TCACTCGATC CTACCAAACC CGTATATGTA
GAGTCGGAGA GTAAAAAAGT AGGGGGGTTA CATGTCCCTG ACGCCTTGAT GGAAAAGATT
CGCAATGGGT CTTGTATTGA ATTGAGATCG AACACTCAAA CACGAGTGTC CTGGTTAATT
CGTGAATACC ATCACTTTCT AACCGATACC AATAATTTCA AGCGCAAGCT AGCCTTGCTC
ACTGCGCATT ATGGAAAAGT GCAGATCGCC AAGTGGAATG AGGTAATTGA TGCGGGAAAT
TTTCCAGAGC TTGTAGAAGA GCTGCTAGTA AAGCATTATG ACCCGTCGTA CCAATCGTCC
ATAGATCGCA ACTTCCCCCA ATACAGGATT GATCATTTTG TAAAACTAGA TAGCGATAGT
GATGAGTCGT TTAAGGTATC TGCCAGAGAG ATTCTTATTA AAAGTAATGG GCACTAA
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| Protein sequence | MQPSNPHVLR ADQFLSELGQ FDLVIDVRSP AEFTLDHIPG AVNYPVLGNE ERAKIGTLYK
QVSPFAAKKL GAALVFKNIT AHLENHFLEL PREWRPLIYC WRGGERSGAF THILNRIGWK
AKQLEGGYQG FRRTVIDGLD QAASQFSFQV ICGMTGSGKT RVLHEIGALG AQILDLEGLA
VHRGSVLGNE PNEDQPTQKG FETVLWNALR SLDPTKPVYV ESESKKVGGL HVPDALMEKI
RNGSCIELRS NTQTRVSWLI REYHHFLTDT NNFKRKLALL TAHYGKVQIA KWNEVIDAGN
FPELVEELLV KHYDPSYQSS IDRNFPQYRI DHFVKLDSDS DESFKVSARE ILIKSNGH
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