Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1015 |
Symbol | |
ID | 6184079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 886009 |
End bp | 887679 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671633 |
Product | Electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001797810 |
Protein GI | 171463697 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.103701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.772735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG CAGAGCTGGT TGAGCAATTT GGTCCTAGAG ACTCCATGGA CTATGACCTG GTCATCGTTG GTGGTGGGCC CGCAGGCCTC TCCGCCGCCA TTAAAGCTAA GCAACTAGCC AACTCCTCAG GCAAAGAAAT TAGCGTTTGC GTTCTGGAAA AAGGCTCTGA AATCGGAGCA CACATTCTTT CAGGTGCCGT GATGGACCCC AAAGCGCTTA CTGAATTATT TCCCAACTGG AAAAAATTAG GCGCCCCACT AAATACGGAA GTCACTCAAG ATCAGTTTTT ATTCTTGACT AGCGAGAAGT CATATCAAGT TCCCAATTGG ATGTTGCCGA ATTGCTTTAA GAATGAAGGC AACTACATTG TGAGTCTTGC AAACGTGACT CGTTGGCTTG GTCAACAAGC AGAAAATCTC GGCGTTGAAA TCTTTCCTGG TTTTCCAGCA GCAGAAATTC TCTATAACGA ACAAGGCGCT GTATGCGGAG TCGTCACCGG CTCCATGGGC TTGGATAAGG AAGGTAATCC AACCGATCAG TTTCAGCTCG GCATGGAATT GCGTGGCAAG TACACCCTAT TCGCCGAAGG TTCACGAGGC CACCTCGGCA AGCAACTTAT TTCTAAATTT GCATTAGATA AAGAAGCTGA TCCGCAAAGC TACGGTATTG GCATCAAGGA GCTGTGGGAA GTTGAGCCCT CCAAGAGTAA GCCGGGTCTC GTAGTGCACA CGGCTGGCTG GCCTTTAGAG AGCGATACCT ATGGTGGGTC ATTCCTCTAT CACTTAGGTG ATAACAAGGT TGCAGTCGGC TTGGTGGTGG GCCTTTCCTA CAAGAATCCC TACCTCTCCC CTTTTGAAGA ATTTCAACGC TATAAGTTGC ACCAAAAAAT TCGCGAGACT TTTGAAGGCG GCAAACGCAT TGCCTATGGA GCACGCGCAC TAACTGCAGG CGGATTAAAC AGCCTTCCAA AAACAGTATT TCCTGGTGGC GCATTGATTG GTTGCGATGC TAGCTTCCTC AATGCCTCAC GCATCAAAGG CAGTCATGCC GCGATTAAGA CGGGTATGCT GGCTGCAGAA GCAGCAGTAG CGGCCATTAA TGAAAATCGC TCTGAAGATG TTTTGTCCGC ATACCCTACC GCCTTTCAAA ATAGTTGGCT GCATACAGAA CTTAATCAAG CCCGTAATTT CAAACCCTGG ATGTCTAAAG GTCTCTACGT TGGCACGGTA ATGGTTGGCT TAGAACAAAA ACTATTAGGC GGTAATATGC CGTGGACAGT GCATCTAAAG CATGCTGATC ATGAGTGTCT AGAACCAGCC TCTCAACATC AGCCAATCGA TTATCCAAAA CCGGATGGCA AGATTACATT TGATCGACTT TCTTCTGTAT TTATCTCCAA TACAAACCAT GCCGAGAACC AGCCTATTCA CCTAACGTTG AAGGATGACT CTATTCCAGT GGATGTGAAC CTCAAAACCT ACGCGGGCCC GGAACAACGT TACTGCCCTG CTGGTGTATA CGAGTTTGTA GAAACTGATG GCAAAGCGCG GCTGCAAATC AATTCGCAAA ACTGCGTACA TTGCAAGACG TGTGACATCA AGGACCCCTC TCAAAACATC GTATGGGTTA CACCGAAAGG CGGTGGTGGA CCAAACTACG CAGCCATGTA A
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Protein sequence | MNAAELVEQF GPRDSMDYDL VIVGGGPAGL SAAIKAKQLA NSSGKEISVC VLEKGSEIGA HILSGAVMDP KALTELFPNW KKLGAPLNTE VTQDQFLFLT SEKSYQVPNW MLPNCFKNEG NYIVSLANVT RWLGQQAENL GVEIFPGFPA AEILYNEQGA VCGVVTGSMG LDKEGNPTDQ FQLGMELRGK YTLFAEGSRG HLGKQLISKF ALDKEADPQS YGIGIKELWE VEPSKSKPGL VVHTAGWPLE SDTYGGSFLY HLGDNKVAVG LVVGLSYKNP YLSPFEEFQR YKLHQKIRET FEGGKRIAYG ARALTAGGLN SLPKTVFPGG ALIGCDASFL NASRIKGSHA AIKTGMLAAE AAVAAINENR SEDVLSAYPT AFQNSWLHTE LNQARNFKPW MSKGLYVGTV MVGLEQKLLG GNMPWTVHLK HADHECLEPA SQHQPIDYPK PDGKITFDRL SSVFISNTNH AENQPIHLTL KDDSIPVDVN LKTYAGPEQR YCPAGVYEFV ETDGKARLQI NSQNCVHCKT CDIKDPSQNI VWVTPKGGGG PNYAAM
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