| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1012 |
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| Symbol | |
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| ID | 6184077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 882549 |
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| End bp | 884372 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671630 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001797807 |
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| Protein GI | 171463694 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTG GTGTTGATCC TTCGCTTCAT GCTCATAAAA AGGGCGATGC AAAGCACACC
CATAGCAAAC AAGTCTCCAA TCAAAATTTA CTGTTAATCG CCTTAGTTCT TACTTTAGCC
TTTTCAGGCA TTGAAGGTGC AGCAGCATAC TTTGCTAACT CATTAGCACT AATCTCCGAT
GCTGGCCATA TGGTCACAGA TGCTGCAGCT TTAGGATTGG CTTTGTTGGC GCAAATTATT
TCCCGTCGTC CACCATCTCC AAAGCATTCA TTTGGCTTTG GTCGTGCTGA GGCGCTTGCT
GCATTTGTAA ATAGTATTGT GATGCTAGTT TTAGTTGTTT GGATCATGGT CGAGGCAATT
AGCCGCTTCT ATGACCCGCA TAAGGTCGAT GGCTTCACCG TTACTGTTGT GGCAGCAGTT
GGCTTGCTGA TGAACATCGT TGTGGCGTGG GTGTTATCAC GCAATAAGAA GAGTGTGAAT
ACCCGCGCAG CTTTAGTGCA TGTCATGGGT GATTTACTGG GATCAATCGC TGCATTGATT
GCTGGTGTTG TTATTCAGTT AACAGGATGG ATGCCAATCG ATGCCATTCT CTCAATCTTG
GTATCTCTGC TGATTCTCAA GTCTACAATC TCAATACTTC ACGAGTCCTA TCACTTCTTG
ATGGAAGGCG TGCCACTTCA TATTAATTAT TTGGAAGTTG GAACTGATCT GAAGAATGTG
CCTGGCGTAT TGGCTGTTCA CGACCTACAT GTGTGGGAGA TGACACCAAG CTTTCCAGCG
CTCATTGGCC ATATTGAAAT AGTTGATATG CAAGAGTGGC CGCAGATCAT GTCTCGTATT
AATGCGATGC TTTTAGATAA GTACGGCATT GATCATGTGA CTTTGCAACC AGAAGAGGTT
GGCGAAGATC GCGACCATGA TCATGCAGGC CATGATTTAC ACAACGATAC ACAGACAGCT
AACGTGTTTC ATGACGGTGA AACTTTTTAT GTGGACTGCG CTAGTGGCGA TGAAAAATAC
CGCATGGCCT ATCACGCTTG GGGAAACCCA AGTAATAAAG TGTTGCTTTG TGTTCATGGC
CTCACTCGAC GGGGTAGTGA CTTTAAGACG CTTGCTCAGG CAATGTGCAA TGACTATTAC
GTAGTCTGCC CAGATGTGGT GGGAAGAGGG GATTCTGATC GTCTTAGTAA TCCAATGCTG
TATGCCGTAC CTCAGTATGT GTCTGATATT GCAACCTTAG TGAAAAAGCT CGGTGTTTCA
CAAGTGGATT GGTTTGGCAC ATCGATGGGC GGTCTCATTG GTATGGTCTA TGCCGCCATG
CTGAATTCAC CTATCCGCCG CATGTTGATT AATGATGTAG GTCCGCGTAT CGAACCTGAG
GCAATTAAGC GTTTAGGATC TTACGTAGGT CAGCCATTTG CCTTTAGCAG TCGGGCTGAT
GCACTCAATC GTTTGAATGA AATTTGCGCC AGTTTTGGCG AGCACACTGC GCAAGAGTGG
GAAATCTATA ACGGCCCCAT GTTAGTTCAG AAGGAGGGAA AATGGATCAT GCATTACGAT
CCAGATATTT CAGTGCCGTT CGCTTCTGTA AACCCAATCA TGGCTAAGGC CGGTGAAATG
GCGATGTGGC ACGCTTTCAA GCAAATTCAT ATTCCAATGC TGATTGTTCG TGGCGGTAAT
TCTGATTTGT TATCTGCAGC AACTGTAGCA GAAATGTGCA AAGTAAATCC TTATGCACGC
AGTATAGAGA TCCCAAATGT AGGGCATGCT CCTGCATTTG TGAAGTCAGA ACAAATCGCA
TTGGCGAAAG AATTTTTTAG TTAA
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| Protein sequence | MNSGVDPSLH AHKKGDAKHT HSKQVSNQNL LLIALVLTLA FSGIEGAAAY FANSLALISD
AGHMVTDAAA LGLALLAQII SRRPPSPKHS FGFGRAEALA AFVNSIVMLV LVVWIMVEAI
SRFYDPHKVD GFTVTVVAAV GLLMNIVVAW VLSRNKKSVN TRAALVHVMG DLLGSIAALI
AGVVIQLTGW MPIDAILSIL VSLLILKSTI SILHESYHFL MEGVPLHINY LEVGTDLKNV
PGVLAVHDLH VWEMTPSFPA LIGHIEIVDM QEWPQIMSRI NAMLLDKYGI DHVTLQPEEV
GEDRDHDHAG HDLHNDTQTA NVFHDGETFY VDCASGDEKY RMAYHAWGNP SNKVLLCVHG
LTRRGSDFKT LAQAMCNDYY VVCPDVVGRG DSDRLSNPML YAVPQYVSDI ATLVKKLGVS
QVDWFGTSMG GLIGMVYAAM LNSPIRRMLI NDVGPRIEPE AIKRLGSYVG QPFAFSSRAD
ALNRLNEICA SFGEHTAQEW EIYNGPMLVQ KEGKWIMHYD PDISVPFASV NPIMAKAGEM
AMWHAFKQIH IPMLIVRGGN SDLLSAATVA EMCKVNPYAR SIEIPNVGHA PAFVKSEQIA
LAKEFFS
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