Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1010 |
Symbol | thrS |
ID | 6184327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 878357 |
End bp | 880279 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671627 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001797805 |
Protein GI | 171463692 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTAG TTACTCTGCC AGATGGATCA AAACGTGAGT TTGAGGCGCC CGTTCGTGTA GCGGATGTTG CGCAAAGCAT CGGTAGTGGT CTTGCAAAAG CTGCTTTAGG CGGCATTGTT GATGGCAAGA TGGTCGACAC CAGCTTTGTG ATCGATAAAG ACAGTCAACT GGCCATCATC ACTGATAAGA GCCCTGAAGC ATTAGAGATT GTTCGTCACT CCACTGCTCA CTTATTGGCC TATGCTGTAA AGGAGTTATT TCCAGAAGCT CAGGTAACTA TTGGTCCAGT GATCGAGAAT GGTTTTTACT ATGACTTTTC GTATCACCGC CCATTTACTC CAGATGACTT AGTTGCTTTA GAAAAGAAAA TGACTGAGCT CGCTAAAAGA GACGAGCCAG TAACGCGCAC CGTAATGCCA CGTGATGAAG CAGTTGAGTT TTTTAAAAAG CAAGGCGAGA ACTACAAAGC AGAACTGATT GCGAGCATTC CGCAAGGCGA AGATGTTTCC TTGTATGCAG AAGGTAAGTT CACCGATTTA TGTCGCGGAC CCCACGTGCC ATCTACTGGA AAGCTGAAGG TATTTAAACT GATGAAGCTA GCTGGTGCTT ACTGGCGTGG CGATAGTAAA AATGAAATGT TGCAGCGTAT CTACGGTACT ACTTGGCTAC GTAAAGAAGA TCAAGATGCT TACCTGCATA TGCTTGAGGA GTCTGAGAAG CGTGATCATC GCCGCCTCGG CAAGCAACTC GATTTATTCC ATTTCCAAGA GGAAGCGCCC GGATTAATTT TCTGGCATCC AAAGGGTTGG TCGATTTGGC AGGAAGTTGA GCAATACATG CGTCGCGTGT ATCAGCAAGA AGGCTACCAA GAAGTTAAAG CACCGCAGAT TTTGGATCGT GGTCTTTGGG AAAAATCAGG CCACTGGGAA AACTACAAAG AAAATATGTT TACGACAGAG TCGGAGAATC GTGCTTATGC ATTAAAGCCG ATGAACTGTC CTGGGCATGT GCAAATTTAT AACTCTGGAT TGCATAGCTA CCGTGAGTTG CCATTGCGTT TTGGTGAGTT TGGCCAATGT CACCGCAATG AACCATCAGG TGCTTTGCAT GGTCTGATGC GCGTGCGTGG CTTCACACAA GATGATGGCC ATATTTTCTG TACCGAAGAC CAAATTCAGT CTGAAGTAGC CGCATTTGAT AAAGCAGTGC GCGCTGTTTA TCAAGATTTT GGTTTTACTG AGGTTGCTGT GAAGCTCGCT CTTCGTCCGG CAAAGCGTGT TGGCGATGAC GCCATTTGGG ATAAGGCTGA AGAGGCCTTG CGCGGCGCAT TGAAGGCTTC TGGCCAAGAG TGGGAAGAAT TGCCAGGCGA GGGCGCTTTT TATGGTCCGA AGATCGAGTA TCACCTTAAG GACTCGATTG GGCGTACTTG GCAGTGCGGC ACGATTCAGG TCGATTTCTC TATGCCAGCC CGATTGGGCG CTGAATATGT AGCTGAAAAT AATAGCCGCA AGACCCCAGT AATGCTCCAT AGGGCAATTG TCGGCTCTTT AGAGCGTTTT ATCGGCATTT TGATTGAAAA TCACACTGGA AACATGCCTG TTTGGCTTGC TCCTACCCAG GCTGTAGTCC TTAATATCTC CGGAAATTCT GCTGCATATG CACAACAAGT GCAGCAATTG CTGAAAAAAC AAGGGTTTAG AATCGAATCG GATTTGCGAA ACGAGAAAAT TACGTATAAA ATACGCGAGT ACGCATTACA GAAGACCCCG TTTTTGCTTA TTGTAGGGGA TAAAGAATCT GAAAGTAATA CGGTGGCCGT TCGTGCCCGT GGCGGAGTTG ATTTAGGTGT AATGCCTCTT GATGCCTTCG TTGCCCGACT CCAGCAGGAT ATATCCCAGA AAGTCGGACC CGAGCCTAGC TAG
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Protein sequence | MLVVTLPDGS KREFEAPVRV ADVAQSIGSG LAKAALGGIV DGKMVDTSFV IDKDSQLAII TDKSPEALEI VRHSTAHLLA YAVKELFPEA QVTIGPVIEN GFYYDFSYHR PFTPDDLVAL EKKMTELAKR DEPVTRTVMP RDEAVEFFKK QGENYKAELI ASIPQGEDVS LYAEGKFTDL CRGPHVPSTG KLKVFKLMKL AGAYWRGDSK NEMLQRIYGT TWLRKEDQDA YLHMLEESEK RDHRRLGKQL DLFHFQEEAP GLIFWHPKGW SIWQEVEQYM RRVYQQEGYQ EVKAPQILDR GLWEKSGHWE NYKENMFTTE SENRAYALKP MNCPGHVQIY NSGLHSYREL PLRFGEFGQC HRNEPSGALH GLMRVRGFTQ DDGHIFCTED QIQSEVAAFD KAVRAVYQDF GFTEVAVKLA LRPAKRVGDD AIWDKAEEAL RGALKASGQE WEELPGEGAF YGPKIEYHLK DSIGRTWQCG TIQVDFSMPA RLGAEYVAEN NSRKTPVMLH RAIVGSLERF IGILIENHTG NMPVWLAPTQ AVVLNISGNS AAYAQQVQQL LKKQGFRIES DLRNEKITYK IREYALQKTP FLLIVGDKES ESNTVAVRAR GGVDLGVMPL DAFVARLQQD ISQKVGPEPS
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