Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0994 |
Symbol | |
ID | 6182883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 863250 |
End bp | 864101 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671612 |
Product | PHP domain protein |
Protein accession | YP_001797791 |
Protein GI | 171463678 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000016176 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCT TTTCACCCCC AAATACCGAC TTGCATTGCC ATTCAGTGAT TTCTGATGGC ACTTTGACGC CTGAAGAATT GGCTGAACGC GCTAAAGCCA ATGGAGTGCA CTTGTGGGCG CTGACCGACC ATGATGAATT GGGTGGGCAA AAACGCGCTC GTGCAGCAGC TAGTGCTCTC AATATTGATT ACCTTGCGGG TGTTGAAATA TCGGTGACCT GGATGGGTGA GACTATTCAT ATTGTTGGTC TTGGAATCGA TGCGGAACAT ATTGGAATTA TTGAGGGCTT ACGTCGCACG CGGGATGGAC GGTCAAACCG TGCACAATTG ATGGCTGAGC AATTGCTTAA CGTAGGTATC CCTGGTGCTC ATGAAGGCGC ACTTCATTTT GCTGGCAATC ATGAATTAAT TTCAAGAACT CACTTCGCAC GTTTTTTAGT GGAGCAGGGT GTTTGCCGTA ATACAGAGCA TGTATTTAAA AATTATTTAA TTGAAGGTAA GCCTGGTTAC GTCCCTCATC AGTGGGCTAG CCTTGATAAT GCCGTTAACT GGATCAAGTC GACTGGCGGC GTAGCAGTCA TTGCGCATCC TGGCCGTTAC AGCAGGCTCA ATGCCATGCA AATGGATGAA CTCTATAAGC ACTTTAAAGA TTTAGGCGGG TTGGCAATTG AGGTCATTAC CGGAAGCCAT AGTCCAGATC AATATAAAAC GTTTGCAAAG ATTGCTCAGC AGTATGGTTT TATGGCTTCG CGCGGTTCGG ATTTTCATGA TCCGAATGAA AGTCATATTG ATTTGGGTAA TTTGCCACAT TTGCCTGACC ATCTCACCCC TGTTTGGTCT GCATTTTATT AA
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Protein sequence | MSSFSPPNTD LHCHSVISDG TLTPEELAER AKANGVHLWA LTDHDELGGQ KRARAAASAL NIDYLAGVEI SVTWMGETIH IVGLGIDAEH IGIIEGLRRT RDGRSNRAQL MAEQLLNVGI PGAHEGALHF AGNHELISRT HFARFLVEQG VCRNTEHVFK NYLIEGKPGY VPHQWASLDN AVNWIKSTGG VAVIAHPGRY SRLNAMQMDE LYKHFKDLGG LAIEVITGSH SPDQYKTFAK IAQQYGFMAS RGSDFHDPNE SHIDLGNLPH LPDHLTPVWS AFY
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