Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0991 |
Symbol | |
ID | 6183787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 860477 |
End bp | 861349 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671610 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001797789 |
Protein GI | 171463676 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000339523 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCTA TCGTTACCCC GATGTTTGAG GACGGGAGCT TAGATTTTGC AAGCCTACGT TCTTTGTTGG ATTGGCATGT AGCGGAAGGC ACCGATGGAA TCGTGATTGT GGGAACTAGC GGCGAATCTC CTACCGTTTC TGTTGAAGAG CACTGCGAAC TTATTCGTGT AACAGTTGAG CAAATTGCTG GGCGTATACC GGTGATTGCC GGTACCGGTG GTAACTCGAC GATTGAAGCG ATAGAACTGA CTAAATTCGC CAAGCAGGTT GGCGCAGATG TTAGCTTGCA AGTTGTCCCG TACTACAACA AGCCAACACA AGAGGGTATG TATGCCCACT TTAAAAAGAT TGCTGAGTCC GTGGACCTGC CTGTAATTTT GTATAACGTT CCCGGTAGAA CGGTTGCCGA TTTAGCGGGA GATACAGTTG TCCGTTTGGC GGGCGTCCCA GGCATTATCG GAATTAAAGA GGCTACAGGT AGCTTAGAGC GCGGCACTTT ATTGATCAAT GATCTTAAGC GTGCTGGCCA TCAAGATTTT TCAGTATTCT CTGGCGACGA TCTCACGGCT GCAATGCTGA TGTTGATGGG CGGTAAAGGG AATATTTCTG TTACTGCGAA CATTGCACCA CGGCTAATGC ATGAGCTCTG TATTGCAGCC ATGTCTGATG ATGTAAGAAG AACCCGTGAA ATTCAATATC AATTGATTGC GGTTCATAAA GCCATGTTTA CAGAGGCAAA CCCGATTCCA GTGAAGTGGG CCCTACATGA AATGGGCAAG ATTACCGCAG GTATCCGTTT GCCACTCACT CCATTAAGCA ATTCCCTTCG TGAGCCGTTA AAGGCAGCTT TAAAACAGGC CAATTTAATA TGA
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Protein sequence | MPAIVTPMFE DGSLDFASLR SLLDWHVAEG TDGIVIVGTS GESPTVSVEE HCELIRVTVE QIAGRIPVIA GTGGNSTIEA IELTKFAKQV GADVSLQVVP YYNKPTQEGM YAHFKKIAES VDLPVILYNV PGRTVADLAG DTVVRLAGVP GIIGIKEATG SLERGTLLIN DLKRAGHQDF SVFSGDDLTA AMLMLMGGKG NISVTANIAP RLMHELCIAA MSDDVRRTRE IQYQLIAVHK AMFTEANPIP VKWALHEMGK ITAGIRLPLT PLSNSLREPL KAALKQANLI
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